Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AL049872.1-201ENST00000556323 322 ntBASIC4.26□□□□□ -1.73
CTSDP07339 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC4.26□□□□□ -1.73
CTSDP07339 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC4.26□□□□□ -1.73
CTSDP07339 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.26□□□□□ -1.73
CTSDP07339 AC027243.2-201ENST00000602530 724 ntBASIC4.26□□□□□ -1.73
CTSDP07339 RNF138P2-201ENST00000603490 592 ntBASIC4.26□□□□□ -1.73
CTSDP07339 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.26□□□□□ -1.73
CTSDP07339 AC008115.3-201ENST00000614874 549 ntBASIC4.26□□□□□ -1.73
CTSDP07339 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTSDP07339 AC007683.2-201ENST00000624681 714 ntBASIC4.26□□□□□ -1.73
CTSDP07339 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CTSDP07339 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTSDP07339 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.26□□□□□ -1.73
CTSDP07339 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.26□□□□□ -1.73
CTSDP07339 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTSDP07339 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.26□□□□□ -1.73
CTSDP07339 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CTSDP07339 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CTSDP07339 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTSDP07339 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.26□□□□□ -1.73
CTSDP07339 AC000123.3-201ENST00000624029 4975 ntBASIC4.26□□□□□ -1.73
CTSDP07339 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTSDP07339 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTSDP07339 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.26□□□□□ -1.73
CTSDP07339 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTSDP07339 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTSDP07339 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.26□□□□□ -1.73
CTSDP07339 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CTSDP07339 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTSDP07339 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CTSDP07339 SCARNA15-201ENST00000607520 4325 ntBASIC4.25□□□□□ -1.73
CTSDP07339 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.25□□□□□ -1.73
CTSDP07339 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
CTSDP07339 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.25□□□□□ -1.73
CTSDP07339 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
CTSDP07339 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CTSDP07339 RNA5SP90-201ENST00000364801 99 ntBASIC4.25□□□□□ -1.73
CTSDP07339 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.25□□□□□ -1.73
CTSDP07339 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CTSDP07339 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
CTSDP07339 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.25□□□□□ -1.73
CTSDP07339 AC079807.1-201ENST00000429993 481 ntBASIC4.25□□□□□ -1.73
CTSDP07339 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.25□□□□□ -1.73
CTSDP07339 FMO7P-201ENST00000436045 768 ntBASIC4.25□□□□□ -1.73
CTSDP07339 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.25□□□□□ -1.73
CTSDP07339 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.25□□□□□ -1.73
CTSDP07339 EEF1B2P6-201ENST00000445713 673 ntBASIC4.25□□□□□ -1.73
CTSDP07339 AL589765.3-201ENST00000446084 462 ntBASIC4.25□□□□□ -1.73
CTSDP07339 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.25□□□□□ -1.73
CTSDP07339 RPL31P15-201ENST00000449770 338 ntBASIC4.25□□□□□ -1.73
CTSDP07339 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CTSDP07339 AL445433.1-201ENST00000457507 257 ntBASIC4.25□□□□□ -1.73
CTSDP07339 AC020779.1-201ENST00000478757 796 ntBASIC4.25□□□□□ -1.73
CTSDP07339 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CTSDP07339 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.25□□□□□ -1.73
CTSDP07339 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.25□□□□□ -1.73
CTSDP07339 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.25□□□□□ -1.73
CTSDP07339 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.25□□□□□ -1.73
CTSDP07339 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
CTSDP07339 AL512310.9-201ENST00000553311 948 ntBASIC4.25□□□□□ -1.73
CTSDP07339 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CTSDP07339 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.25□□□□□ -1.73
CTSDP07339 AC097505.1-201ENST00000610199 565 ntBASIC4.25□□□□□ -1.73
CTSDP07339 OR13C1P-202ENST00000641378 2919 ntBASIC4.25□□□□□ -1.73
CTSDP07339 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CTSDP07339 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CTSDP07339 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
CTSDP07339 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CTSDP07339 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CTSDP07339 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CTSDP07339 SCN1A-220ENST00000641603 12506 ntBASIC4.25□□□□□ -1.73
CTSDP07339 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
CTSDP07339 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CTSDP07339 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.25□□□□□ -1.73
CTSDP07339 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CTSDP07339 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CTSDP07339 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CTSDP07339 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.24□□□□□ -1.73
CTSDP07339 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CTSDP07339 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CTSDP07339 NEAT1-202ENST00000501122 22743 ntBASIC4.24□□□□□ -1.73
CTSDP07339 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
CTSDP07339 TMSB4XP4-201ENST00000323496 618 ntBASIC4.24□□□□□ -1.73
CTSDP07339 MIR133B-201ENST00000362210 119 ntBASIC4.24□□□□□ -1.73
CTSDP07339 RN7SKP292-201ENST00000365522 317 ntBASIC4.24□□□□□ -1.73
CTSDP07339 OR4K12P-201ENST00000406538 961 ntBASIC4.24□□□□□ -1.73
CTSDP07339 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.24□□□□□ -1.73
CTSDP07339 RN7SKP247-201ENST00000411094 308 ntBASIC4.24□□□□□ -1.73
CTSDP07339 AC093155.2-201ENST00000420734 937 ntBASIC4.24□□□□□ -1.73
CTSDP07339 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CTSDP07339 RPS29P14-201ENST00000431518 171 ntBASIC4.24□□□□□ -1.73
CTSDP07339 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.24□□□□□ -1.73
CTSDP07339 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.24□□□□□ -1.73
CTSDP07339 RPS29P10-201ENST00000439197 166 ntBASIC4.24□□□□□ -1.73
CTSDP07339 AC091544.1-201ENST00000484702 348 ntBASIC4.24□□□□□ -1.73
CTSDP07339 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.24□□□□□ -1.73
CTSDP07339 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.24□□□□□ -1.73
CTSDP07339 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.24□□□□□ -1.73
CTSDP07339 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.24□□□□□ -1.73
CTSDP07339 AC005868.1-201ENST00000536421 331 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 162.5 ms