Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC3.03□□□□□ -1.92
APOBP04114 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.03□□□□□ -1.92
APOBP04114 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC3.03□□□□□ -1.92
APOBP04114 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.03□□□□□ -1.92
APOBP04114 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC3.03□□□□□ -1.92
APOBP04114 AL023881.1-201ENST00000621088 301 ntBASIC3.03□□□□□ -1.92
APOBP04114 NBPF12-202ENST00000579935 5035 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
APOBP04114 CREB3L2-201ENST00000330387 7412 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
APOBP04114 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.93
APOBP04114 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC3.03□□□□□ -1.93
APOBP04114 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC3.03□□□□□ -1.93
APOBP04114 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC3.03□□□□□ -1.93
APOBP04114 TBC1D30-204ENST00000542120 7433 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
APOBP04114 AC004817.4-201ENST00000602396 3625 ntBASIC3.02□□□□□ -1.93
APOBP04114 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
APOBP04114 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
APOBP04114 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
APOBP04114 OR13Z1P-201ENST00000416141 834 ntBASIC3.02□□□□□ -1.93
APOBP04114 AC091390.3-201ENST00000426478 338 ntBASIC3.02□□□□□ -1.93
APOBP04114 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC3.02□□□□□ -1.93
APOBP04114 NPM1P6-201ENST00000521088 871 ntBASIC3.02□□□□□ -1.93
APOBP04114 AL049839.1-201ENST00000556151 657 ntBASIC3.02□□□□□ -1.93
APOBP04114 RN7SL652P-201ENST00000577769 300 ntBASIC3.02□□□□□ -1.93
APOBP04114 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC3.02□□□□□ -1.93
APOBP04114 AC073137.1-201ENST00000605636 634 ntBASIC3.02□□□□□ -1.93
APOBP04114 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.02□□□□□ -1.93
APOBP04114 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC3.02□□□□□ -1.93
APOBP04114 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
APOBP04114 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
APOBP04114 DNAJA1P3-201ENST00000399417 1194 ntBASIC3.02□□□□□ -1.93
APOBP04114 SNORA11.1-201ENST00000408133 129 ntBASIC3.02□□□□□ -1.93
APOBP04114 RPS3AP25-201ENST00000411660 793 ntBASIC3.02□□□□□ -1.93
APOBP04114 RPL7AP25-201ENST00000423357 805 ntBASIC3.02□□□□□ -1.93
APOBP04114 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC3.02□□□□□ -1.93
APOBP04114 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
APOBP04114 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.02□□□□□ -1.93
APOBP04114 MIR5699-201ENST00000578903 90 ntBASIC3.02□□□□□ -1.93
APOBP04114 MIR6853-201ENST00000619642 74 ntBASIC3.02□□□□□ -1.93
APOBP04114 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.02□□□□□ -1.93
APOBP04114 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
APOBP04114 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
APOBP04114 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC3.02□□□□□ -1.93
APOBP04114 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
APOBP04114 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
APOBP04114 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
APOBP04114 LSAMP-205ENST00000490035 9446 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
APOBP04114 OR1L6-202ENST00000373684 1044 ntBASIC3.02□□□□□ -1.93
APOBP04114 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC3.02□□□□□ -1.93
APOBP04114 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
APOBP04114 RPL36AP41-201ENST00000493820 306 ntBASIC3.02□□□□□ -1.93
APOBP04114 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.02□□□□□ -1.93
APOBP04114 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
APOBP04114 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
APOBP04114 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3.02□□□□□ -1.93
APOBP04114 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC3.02□□□□□ -1.93
APOBP04114 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
APOBP04114 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
APOBP04114 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
APOBP04114 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
APOBP04114 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC3.02□□□□□ -1.93
APOBP04114 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC3.02□□□□□ -1.93
APOBP04114 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
APOBP04114 ABCC2-202ENST00000370449 5312 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
APOBP04114 AL451142.1-201ENST00000375867 775 ntBASIC3.02□□□□□ -1.93
APOBP04114 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC3.02□□□□□ -1.93
APOBP04114 CEACAMP8-201ENST00000413902 580 ntBASIC3.02□□□□□ -1.93
APOBP04114 TXNP2-201ENST00000443918 295 ntBASIC3.02□□□□□ -1.93
APOBP04114 Z95327.1-201ENST00000446082 482 ntBASIC3.02□□□□□ -1.93
APOBP04114 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.02□□□□□ -1.93
APOBP04114 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC3.02□□□□□ -1.93
APOBP04114 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC3.02□□□□□ -1.93
APOBP04114 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.02□□□□□ -1.93
APOBP04114 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.02□□□□□ -1.93
APOBP04114 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.02□□□□□ -1.93
APOBP04114 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC3.02□□□□□ -1.93
APOBP04114 AC084824.2-201ENST00000548906 345 ntBASIC3.02□□□□□ -1.93
APOBP04114 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.02□□□□□ -1.93
APOBP04114 HRNR-201ENST00000368801 9623 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
APOBP04114 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
APOBP04114 EP400-205ENST00000389562 12836 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
APOBP04114 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.01□□□□□ -1.93
APOBP04114 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC3.01□□□□□ -1.93
APOBP04114 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC3.01□□□□□ -1.93
APOBP04114 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
APOBP04114 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC3.01□□□□□ -1.93
APOBP04114 AL354766.1-201ENST00000423396 542 ntBASIC3.01□□□□□ -1.93
APOBP04114 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.01□□□□□ -1.93
APOBP04114 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC3.01□□□□□ -1.93
APOBP04114 SSR3-206ENST00000476217 807 ntTSL 3 BASIC3.01□□□□□ -1.93
APOBP04114 AL133372.1-201ENST00000493565 745 ntBASIC3.01□□□□□ -1.93
APOBP04114 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
APOBP04114 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.01□□□□□ -1.93
APOBP04114 RN7SL290P-201ENST00000578661 300 ntBASIC3.01□□□□□ -1.93
APOBP04114 RN7SL339P-201ENST00000580597 296 ntBASIC3.01□□□□□ -1.93
APOBP04114 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC3.01□□□□□ -1.93
APOBP04114 MIR6839-201ENST00000620425 113 ntBASIC3.01□□□□□ -1.93
APOBP04114 AC034229.5-201ENST00000624258 185 ntBASIC3.01□□□□□ -1.93
APOBP04114 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
APOBP04114 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
APOBP04114 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms