Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 MIR3944-201ENST00000581277 108 ntBASIC8.8□□□□□ -1
CUX2O14529 AC008814.1-201ENST00000603797 406 ntBASIC8.8□□□□□ -1
CUX2O14529 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC8.8□□□□□ -1
CUX2O14529 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
CUX2O14529 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
CUX2O14529 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC8.8□□□□□ -1
CUX2O14529 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC8.79□□□□□ -1
CUX2O14529 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC8.79□□□□□ -1
CUX2O14529 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
CUX2O14529 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC8.79□□□□□ -1
CUX2O14529 RPL11P3-201ENST00000395256 523 ntBASIC8.79□□□□□ -1
CUX2O14529 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC8.79□□□□□ -1
CUX2O14529 ARL2BPP10-201ENST00000446487 531 ntBASIC8.79□□□□□ -1
CUX2O14529 REG1CP-206ENST00000447469 496 ntBASIC8.79□□□□□ -1
CUX2O14529 AC012400.1-201ENST00000518452 381 ntBASIC8.79□□□□□ -1
CUX2O14529 OR8A2P-201ENST00000528631 952 ntBASIC8.79□□□□□ -1
CUX2O14529 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC8.79□□□□□ -1
CUX2O14529 AC105254.2-201ENST00000603636 436 ntBASIC8.79□□□□□ -1
CUX2O14529 AC005252.1-201ENST00000604518 1063 ntBASIC8.79□□□□□ -1
CUX2O14529 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC8.79□□□□□ -1
CUX2O14529 AC091953.5-201ENST00000622919 233 ntBASIC8.79□□□□□ -1
CUX2O14529 AP003400.2-201ENST00000624036 666 ntBASIC8.79□□□□□ -1
CUX2O14529 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
CUX2O14529 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
CUX2O14529 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
CUX2O14529 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
CUX2O14529 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC8.79□□□□□ -1
CUX2O14529 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC8.79□□□□□ -1
CUX2O14529 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC8.79□□□□□ -1
CUX2O14529 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC8.79□□□□□ -1
CUX2O14529 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
CUX2O14529 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
CUX2O14529 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
CUX2O14529 SNORA71.3-201ENST00000362582 128 ntBASIC8.78□□□□□ -1
CUX2O14529 SLC4A1APP1-201ENST00000419995 602 ntBASIC8.78□□□□□ -1
CUX2O14529 OR10T1P-201ENST00000424327 947 ntBASIC8.78□□□□□ -1
CUX2O14529 NRBF2P3-201ENST00000432731 865 ntBASIC8.78□□□□□ -1
CUX2O14529 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC8.78□□□□□ -1
CUX2O14529 CBX1P1-201ENST00000440184 427 ntBASIC8.78□□□□□ -1
CUX2O14529 AC114755.5-201ENST00000447760 831 ntBASIC8.78□□□□□ -1
CUX2O14529 MORF4L1P3-201ENST00000525966 950 ntBASIC8.78□□□□□ -1
CUX2O14529 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC8.78□□□□□ -1
CUX2O14529 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC8.78□□□□□ -1
CUX2O14529 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC8.78□□□□□ -1
CUX2O14529 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC8.78□□□□□ -1
CUX2O14529 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC8.78□□□□□ -1
CUX2O14529 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC8.78□□□□□ -1
CUX2O14529 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC8.78□□□□□ -1
CUX2O14529 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC8.78□□□□□ -1
CUX2O14529 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
CUX2O14529 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC8.78□□□□□ -1
CUX2O14529 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC8.78□□□□□ -1
CUX2O14529 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC8.78□□□□□ -1
CUX2O14529 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC8.78□□□□□ -1
CUX2O14529 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1
CUX2O14529 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1
CUX2O14529 AL590240.1-201ENST00000334118 313 ntBASIC8.77□□□□□ -1
CUX2O14529 RNU1-13P-201ENST00000384499 162 ntBASIC8.77□□□□□ -1
CUX2O14529 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC8.77□□□□□ -1
CUX2O14529 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC8.77□□□□□ -1
CUX2O14529 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC8.77□□□□□ -1
CUX2O14529 MTND2P28-201ENST00000457540 1044 ntBASIC8.77□□□□□ -1
CUX2O14529 FPGT-203ENST00000467578 601 ntTSL 2 BASIC8.77□□□□□ -1
CUX2O14529 RPL7P19-201ENST00000469948 618 ntBASIC8.77□□□□□ -1
CUX2O14529 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC8.77□□□□□ -1
CUX2O14529 OR4A6P-201ENST00000534364 970 ntBASIC8.77□□□□□ -1
CUX2O14529 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC8.77□□□□□ -1
CUX2O14529 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC8.77□□□□□ -1
CUX2O14529 NMNAT1P1-201ENST00000554095 876 ntBASIC8.77□□□□□ -1
CUX2O14529 DMD-222ENST00000474231 5209 ntTSL 5 BASIC8.77□□□□□ -1.01
CUX2O14529 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC8.77□□□□□ -1.01
CUX2O14529 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
CUX2O14529 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC8.77□□□□□ -1.01
CUX2O14529 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CUX2O14529 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
CUX2O14529 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
CUX2O14529 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC8.77□□□□□ -1.01
CUX2O14529 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
CUX2O14529 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
CUX2O14529 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC8.77□□□□□ -1.01
CUX2O14529 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
CUX2O14529 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC8.77□□□□□ -1.01
CUX2O14529 SNORA9-201ENST00000384215 133 ntBASIC8.77□□□□□ -1.01
CUX2O14529 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC8.77□□□□□ -1.01
CUX2O14529 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
CUX2O14529 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC8.76□□□□□ -1.01
CUX2O14529 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC8.76□□□□□ -1.01
CUX2O14529 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
CUX2O14529 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC8.76□□□□□ -1.01
CUX2O14529 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
CUX2O14529 ST7-221ENST00000465133 2155 ntTSL 5 BASIC8.76□□□□□ -1.01
CUX2O14529 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
CUX2O14529 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
CUX2O14529 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC8.76□□□□□ -1.01
CUX2O14529 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC8.76□□□□□ -1.01
CUX2O14529 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CUX2O14529 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CUX2O14529 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC8.76□□□□□ -1.01
CUX2O14529 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC8.76□□□□□ -1.01
CUX2O14529 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC8.76□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms