Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 AC108941.1-201ENST00000502853 530 ntBASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 SSX8-201ENST00000506270 579 ntBASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 AC091849.1-201ENST00000509920 121 ntBASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 NXPE2P1-201ENST00000543705 726 ntBASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 AC026956.1-201ENST00000558741 396 ntBASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 AC040162.2-201ENST00000573092 157 ntBASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 MIR548AB-201ENST00000584917 84 ntBASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 AC044792.1-201ENST00000593294 196 ntBASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 AC087045.1-201ENST00000605856 382 ntBASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 AC012557.1-201ENST00000607115 611 ntBASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 AC079776.5-201ENST00000641920 211 ntBASIC8.27□□□□□ -1.09
ZC3H4Q9UPT8 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 AC117409.1-201ENST00000470499 1310 ntBASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 AC125238.2-201ENST00000430003 1440 ntBASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 OR9G4-201ENST00000302957 984 ntBASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 OR51A10P-201ENST00000307165 937 ntBASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 RNU1-84P-201ENST00000365447 164 ntBASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 Y_RNA.453-201ENST00000384223 109 ntBASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 FGF7P8-201ENST00000402994 292 ntBASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 ARL4AP5-201ENST00000404372 599 ntBASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 AL139805.1-201ENST00000407837 289 ntBASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 RNU2-65P-201ENST00000410162 185 ntBASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 RN7SKP144-201ENST00000411108 279 ntBASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 RPL23AP39-201ENST00000415533 405 ntBASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 RPL23AP19-201ENST00000436229 369 ntBASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 VN1R10P-201ENST00000447106 875 ntBASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 MTCO3P11-201ENST00000455103 774 ntBASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 AC124945.1-201ENST00000485133 188 ntBASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 PPIAP19-201ENST00000486414 492 ntBASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 AC011352.2-201ENST00000514574 1016 ntBASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 YWHABP2-201ENST00000540201 713 ntBASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 AC140063.1-201ENST00000541343 259 ntBASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 GTF2IP22-201ENST00000554443 182 ntBASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 GLYATL1P2-202ENST00000588046 902 ntBASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 AL589863.1-201ENST00000595383 631 ntBASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 AC092111.1-201ENST00000618256 3358 ntBASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
ZC3H4Q9UPT8 AP002800.1-201ENST00000624982 2225 ntBASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC8.25□□□□□ -1.09
ZC3H4Q9UPT8 AC092111.2-201ENST00000611627 1414 ntBASIC8.25□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 394.3 ms