Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
GAFA1Q96PS6 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
GAFA1Q96PS6 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
GAFA1Q96PS6 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
GAFA1Q96PS6 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
GAFA1Q96PS6 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
GAFA1Q96PS6 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
GAFA1Q96PS6 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
GAFA1Q96PS6 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
GAFA1Q96PS6 AP005432.1-201ENST00000580891 3485 ntBASIC4.19□□□□□ -1.74
GAFA1Q96PS6 SNORA70.10-201ENST00000384515 134 ntBASIC4.19□□□□□ -1.74
GAFA1Q96PS6 ATP5HP3-201ENST00000396994 486 ntBASIC4.19□□□□□ -1.74
GAFA1Q96PS6 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.19□□□□□ -1.74
GAFA1Q96PS6 SPTLC1P2-201ENST00000407089 121 ntBASIC4.19□□□□□ -1.74
GAFA1Q96PS6 RPL23AP27-201ENST00000415161 451 ntBASIC4.19□□□□□ -1.74
GAFA1Q96PS6 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.19□□□□□ -1.74
GAFA1Q96PS6 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.19□□□□□ -1.74
GAFA1Q96PS6 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.19□□□□□ -1.74
GAFA1Q96PS6 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.19□□□□□ -1.74
GAFA1Q96PS6 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.19□□□□□ -1.74
GAFA1Q96PS6 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
GAFA1Q96PS6 AC092647.3-201ENST00000443044 633 ntBASIC4.19□□□□□ -1.74
GAFA1Q96PS6 OR7E125P-201ENST00000443450 846 ntBASIC4.19□□□□□ -1.74
GAFA1Q96PS6 MYO5BP2-201ENST00000449815 1277 ntBASIC4.19□□□□□ -1.74
GAFA1Q96PS6 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
GAFA1Q96PS6 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.19□□□□□ -1.74
GAFA1Q96PS6 RN7SL214P-201ENST00000487317 265 ntBASIC4.19□□□□□ -1.74
GAFA1Q96PS6 ENPP7P11-201ENST00000505915 627 ntBASIC4.19□□□□□ -1.74
GAFA1Q96PS6 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.19□□□□□ -1.74
GAFA1Q96PS6 AC147055.3-201ENST00000510547 851 ntBASIC4.19□□□□□ -1.74
GAFA1Q96PS6 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.19□□□□□ -1.74
GAFA1Q96PS6 RNA5SP43-201ENST00000516559 110 ntBASIC4.19□□□□□ -1.74
GAFA1Q96PS6 RN7SKP147-201ENST00000517154 244 ntBASIC4.19□□□□□ -1.74
GAFA1Q96PS6 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.19□□□□□ -1.74
GAFA1Q96PS6 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.19□□□□□ -1.74
GAFA1Q96PS6 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC4.19□□□□□ -1.74
GAFA1Q96PS6 AC012339.2-201ENST00000523996 453 ntBASIC4.19□□□□□ -1.74
GAFA1Q96PS6 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.19□□□□□ -1.74
GAFA1Q96PS6 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.19□□□□□ -1.74
GAFA1Q96PS6 AC090286.3-201ENST00000573133 187 ntBASIC4.19□□□□□ -1.74
GAFA1Q96PS6 MIR4660-201ENST00000583549 74 ntBASIC4.19□□□□□ -1.74
GAFA1Q96PS6 EIF1P5-201ENST00000585002 234 ntBASIC4.19□□□□□ -1.74
GAFA1Q96PS6 AC018445.2-201ENST00000622987 260 ntBASIC4.19□□□□□ -1.74
GAFA1Q96PS6 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.19□□□□□ -1.74
GAFA1Q96PS6 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
GAFA1Q96PS6 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
GAFA1Q96PS6 Z95331.1-201ENST00000623075 23112 ntBASIC4.19□□□□□ -1.74
GAFA1Q96PS6 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
GAFA1Q96PS6 HSPA8P18-201ENST00000439846 1928 ntBASIC4.19□□□□□ -1.74
GAFA1Q96PS6 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
GAFA1Q96PS6 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.18□□□□□ -1.74
GAFA1Q96PS6 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.18□□□□□ -1.74
GAFA1Q96PS6 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.18□□□□□ -1.74
GAFA1Q96PS6 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
GAFA1Q96PS6 AC004817.4-201ENST00000602396 3625 ntBASIC4.18□□□□□ -1.74
GAFA1Q96PS6 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.18□□□□□ -1.74
GAFA1Q96PS6 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
GAFA1Q96PS6 RNA5SP305-201ENST00000362665 119 ntBASIC4.18□□□□□ -1.74
GAFA1Q96PS6 RNU4-4P-201ENST00000364588 130 ntBASIC4.18□□□□□ -1.74
GAFA1Q96PS6 RNA5SP428-201ENST00000365129 132 ntBASIC4.18□□□□□ -1.74
GAFA1Q96PS6 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
GAFA1Q96PS6 LRRC37BP1-201ENST00000398851 714 ntBASIC4.18□□□□□ -1.74
GAFA1Q96PS6 RN7SKP278-201ENST00000410504 342 ntBASIC4.18□□□□□ -1.74
GAFA1Q96PS6 GJA6P-201ENST00000415117 1042 ntBASIC4.18□□□□□ -1.74
GAFA1Q96PS6 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.18□□□□□ -1.74
GAFA1Q96PS6 AC093162.1-201ENST00000419682 124 ntBASIC4.18□□□□□ -1.74
GAFA1Q96PS6 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.18□□□□□ -1.74
GAFA1Q96PS6 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.18□□□□□ -1.74
GAFA1Q96PS6 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.18□□□□□ -1.74
GAFA1Q96PS6 AL450023.3-201ENST00000440592 271 ntBASIC4.18□□□□□ -1.74
GAFA1Q96PS6 NPM1P19-201ENST00000450070 712 ntBASIC4.18□□□□□ -1.74
GAFA1Q96PS6 AL691482.1-201ENST00000453255 87 ntBASIC4.18□□□□□ -1.74
GAFA1Q96PS6 HMGB1P4-201ENST00000455362 567 ntBASIC4.18□□□□□ -1.74
GAFA1Q96PS6 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.18□□□□□ -1.74
GAFA1Q96PS6 RN7SL244P-201ENST00000493405 297 ntBASIC4.18□□□□□ -1.74
GAFA1Q96PS6 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.18□□□□□ -1.74
GAFA1Q96PS6 AC008638.1-201ENST00000506035 866 ntBASIC4.18□□□□□ -1.74
GAFA1Q96PS6 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.18□□□□□ -1.74
GAFA1Q96PS6 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.18□□□□□ -1.74
GAFA1Q96PS6 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.18□□□□□ -1.74
GAFA1Q96PS6 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.18□□□□□ -1.74
GAFA1Q96PS6 AP002799.1-201ENST00000623552 423 ntBASIC4.18□□□□□ -1.74
GAFA1Q96PS6 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC4.18□□□□□ -1.74
GAFA1Q96PS6 MRRFP1-201ENST00000435941 1675 ntBASIC4.18□□□□□ -1.74
GAFA1Q96PS6 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
GAFA1Q96PS6 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
GAFA1Q96PS6 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
GAFA1Q96PS6 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
GAFA1Q96PS6 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
GAFA1Q96PS6 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
GAFA1Q96PS6 CASC19-281ENST00000642118 1554 ntBASIC4.18□□□□□ -1.74
GAFA1Q96PS6 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
GAFA1Q96PS6 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
GAFA1Q96PS6 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
GAFA1Q96PS6 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
GAFA1Q96PS6 MAPK10-328ENST00000641553 4009 ntBASIC4.18□□□□□ -1.74
GAFA1Q96PS6 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.17□□□□□ -1.74
GAFA1Q96PS6 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
GAFA1Q96PS6 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
GAFA1Q96PS6 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms