Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
ECHDC3Q96DC8 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ECHDC3Q96DC8 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ECHDC3Q96DC8 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ECHDC3Q96DC8 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ECHDC3Q96DC8 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
ECHDC3Q96DC8 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ECHDC3Q96DC8 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
ECHDC3Q96DC8 MAPK10-338ENST00000641647 3362 ntBASIC5.2□□□□□ -1.58
ECHDC3Q96DC8 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
ECHDC3Q96DC8 AC011503.2-201ENST00000594230 1500 ntBASIC5.2□□□□□ -1.58
ECHDC3Q96DC8 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ECHDC3Q96DC8 SNURFL-201ENST00000309296 343 ntBASIC5.2□□□□□ -1.58
ECHDC3Q96DC8 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.2□□□□□ -1.58
ECHDC3Q96DC8 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.2□□□□□ -1.58
ECHDC3Q96DC8 DDX39BP1-205ENST00000422507 192 ntBASIC5.2□□□□□ -1.58
ECHDC3Q96DC8 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ECHDC3Q96DC8 VTI1BP4-201ENST00000427516 527 ntBASIC5.2□□□□□ -1.58
ECHDC3Q96DC8 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.2□□□□□ -1.58
ECHDC3Q96DC8 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.2□□□□□ -1.58
ECHDC3Q96DC8 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.2□□□□□ -1.58
ECHDC3Q96DC8 BX842559.2-201ENST00000451418 605 ntBASIC5.2□□□□□ -1.58
ECHDC3Q96DC8 AC108161.1-201ENST00000461060 402 ntBASIC5.2□□□□□ -1.58
ECHDC3Q96DC8 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.2□□□□□ -1.58
ECHDC3Q96DC8 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.2□□□□□ -1.58
ECHDC3Q96DC8 AC098976.1-201ENST00000513014 541 ntBASIC5.2□□□□□ -1.58
ECHDC3Q96DC8 EIF3KP3-201ENST00000514461 639 ntBASIC5.2□□□□□ -1.58
ECHDC3Q96DC8 AC027308.1-201ENST00000517993 110 ntBASIC5.2□□□□□ -1.58
ECHDC3Q96DC8 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.2□□□□□ -1.58
ECHDC3Q96DC8 HMGN2P6-201ENST00000551091 273 ntBASIC5.2□□□□□ -1.58
ECHDC3Q96DC8 MIR3691-201ENST00000578066 90 ntBASIC5.2□□□□□ -1.58
ECHDC3Q96DC8 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.2□□□□□ -1.58
ECHDC3Q96DC8 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
ECHDC3Q96DC8 AC019072.1-201ENST00000604535 1551 ntBASIC5.2□□□□□ -1.58
ECHDC3Q96DC8 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ECHDC3Q96DC8 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ECHDC3Q96DC8 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
ECHDC3Q96DC8 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
ECHDC3Q96DC8 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
ECHDC3Q96DC8 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
ECHDC3Q96DC8 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
ECHDC3Q96DC8 AP005432.1-201ENST00000580891 3485 ntBASIC5.19□□□□□ -1.58
ECHDC3Q96DC8 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.19□□□□□ -1.58
ECHDC3Q96DC8 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ECHDC3Q96DC8 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.19□□□□□ -1.58
ECHDC3Q96DC8 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
ECHDC3Q96DC8 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
ECHDC3Q96DC8 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ECHDC3Q96DC8 RN7SKP213-201ENST00000410746 298 ntBASIC5.19□□□□□ -1.58
ECHDC3Q96DC8 AC009238.2-201ENST00000431026 355 ntBASIC5.19□□□□□ -1.58
ECHDC3Q96DC8 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.19□□□□□ -1.58
ECHDC3Q96DC8 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.19□□□□□ -1.58
ECHDC3Q96DC8 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.19□□□□□ -1.58
ECHDC3Q96DC8 AC109462.1-201ENST00000491087 368 ntBASIC5.19□□□□□ -1.58
ECHDC3Q96DC8 AC016559.2-201ENST00000510759 359 ntBASIC5.19□□□□□ -1.58
ECHDC3Q96DC8 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.19□□□□□ -1.58
ECHDC3Q96DC8 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.19□□□□□ -1.58
ECHDC3Q96DC8 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.19□□□□□ -1.58
ECHDC3Q96DC8 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
ECHDC3Q96DC8 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.19□□□□□ -1.58
ECHDC3Q96DC8 AC092490.3-201ENST00000545370 572 ntBASIC5.19□□□□□ -1.58
ECHDC3Q96DC8 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.19□□□□□ -1.58
ECHDC3Q96DC8 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.19□□□□□ -1.58
ECHDC3Q96DC8 MTCYBP13-201ENST00000578634 1093 ntBASIC5.19□□□□□ -1.58
ECHDC3Q96DC8 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.19□□□□□ -1.58
ECHDC3Q96DC8 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.19□□□□□ -1.58
ECHDC3Q96DC8 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.19□□□□□ -1.58
ECHDC3Q96DC8 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.19□□□□□ -1.58
ECHDC3Q96DC8 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
ECHDC3Q96DC8 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
ECHDC3Q96DC8 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
ECHDC3Q96DC8 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
ECHDC3Q96DC8 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ECHDC3Q96DC8 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
ECHDC3Q96DC8 CASC19-255ENST00000641733 1385 ntBASIC5.18□□□□□ -1.58
ECHDC3Q96DC8 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ECHDC3Q96DC8 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ECHDC3Q96DC8 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ECHDC3Q96DC8 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ECHDC3Q96DC8 RNA5SP305-201ENST00000362665 119 ntBASIC5.18□□□□□ -1.58
ECHDC3Q96DC8 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
ECHDC3Q96DC8 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.18□□□□□ -1.58
ECHDC3Q96DC8 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.18□□□□□ -1.58
ECHDC3Q96DC8 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.18□□□□□ -1.58
ECHDC3Q96DC8 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.18□□□□□ -1.58
ECHDC3Q96DC8 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.18□□□□□ -1.58
ECHDC3Q96DC8 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ECHDC3Q96DC8 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.18□□□□□ -1.58
ECHDC3Q96DC8 RPSAP50-201ENST00000481955 852 ntBASIC5.18□□□□□ -1.58
ECHDC3Q96DC8 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.18□□□□□ -1.58
ECHDC3Q96DC8 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.18□□□□□ -1.58
ECHDC3Q96DC8 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
ECHDC3Q96DC8 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.18□□□□□ -1.58
ECHDC3Q96DC8 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.18□□□□□ -1.58
ECHDC3Q96DC8 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.18□□□□□ -1.58
ECHDC3Q96DC8 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.18□□□□□ -1.58
ECHDC3Q96DC8 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.18□□□□□ -1.58
ECHDC3Q96DC8 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.18□□□□□ -1.58
ECHDC3Q96DC8 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.18□□□□□ -1.58
ECHDC3Q96DC8 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms