Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 RNU6-354P-201ENST00000383862 107 ntBASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 RNU6-610P-201ENST00000384264 107 ntBASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 HMGB3P19-201ENST00000403971 560 ntBASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 AC096533.1-201ENST00000411645 353 ntBASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 AL356968.2-201ENST00000412769 1257 ntBASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 UBE2V1P14-201ENST00000415815 558 ntBASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 VN1R42P-201ENST00000424651 344 ntBASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 AC006994.1-201ENST00000438212 839 ntBASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 AL389915.2-201ENST00000454576 441 ntBASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 OR5H3P-201ENST00000502817 919 ntBASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 AC008427.1-201ENST00000503102 655 ntBASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 RNA5SP400-201ENST00000517155 111 ntBASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 AC118942.1-201ENST00000529674 1035 ntBASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 NPM1P35-201ENST00000533043 868 ntBASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 OR11J2P-201ENST00000555298 907 ntBASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 RNU4ATAC-201ENST00000580972 127 ntBASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 OR7A19P-201ENST00000608051 733 ntBASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SMC1BQ8NDV3 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 AC005618.1-201ENST00000606901 3148 ntBASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 AL359091.1-201ENST00000449048 1734 ntBASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 RNU5E-10P-201ENST00000363506 118 ntBASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 RN7SKP28-201ENST00000364770 305 ntBASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 RNU6-468P-201ENST00000384003 109 ntBASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 RNA5SP487-201ENST00000410186 122 ntBASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 BTF3P9-201ENST00000418784 283 ntBASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 PRPF38AP2-201ENST00000438179 851 ntBASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 AC019185.1-201ENST00000442718 389 ntBASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 MTND2P8-201ENST00000450555 1025 ntBASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 AL139824.2-201ENST00000458731 1095 ntBASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 PDCL3P4-201ENST00000489621 720 ntBASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 TPT1P3-201ENST00000492841 512 ntBASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 SUMO2P5-201ENST00000506790 245 ntBASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 AC021678.3-201ENST00000517893 476 ntBASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 AGGF1P5-201ENST00000567900 919 ntBASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 BMS1P7-201ENST00000602440 1052 ntBASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 AL445647.2-201ENST00000615170 130 ntBASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 AL512427.1-201ENST00000618593 349 ntBASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 AC012414.7-202ENST00000622705 1090 ntBASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 NAMPTP1-201ENST00000440465 2514 ntBASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 AC137056.2-201ENST00000624055 1958 ntBASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
SMC1BQ8NDV3 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SMC1BQ8NDV3 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SMC1BQ8NDV3 AC062029.1-202ENST00000606164 3651 ntBASIC6.9□□□□□ -1.3
SMC1BQ8NDV3 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SMC1BQ8NDV3 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SMC1BQ8NDV3 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms