Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC7.78□□□□□ -1.16
VPS8Q8N3P4 RN7SL319P-201ENST00000480656 221 ntBASIC7.78□□□□□ -1.16
VPS8Q8N3P4 AC090142.2-201ENST00000483263 416 ntBASIC7.78□□□□□ -1.16
VPS8Q8N3P4 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC7.78□□□□□ -1.16
VPS8Q8N3P4 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC7.78□□□□□ -1.16
VPS8Q8N3P4 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC7.78□□□□□ -1.16
VPS8Q8N3P4 CASC19-203ENST00000523510 575 ntTSL 3 BASIC7.78□□□□□ -1.16
VPS8Q8N3P4 EIF4A2P5-201ENST00000529914 499 ntBASIC7.78□□□□□ -1.16
VPS8Q8N3P4 EDDM3DP-201ENST00000554692 434 ntBASIC7.78□□□□□ -1.16
VPS8Q8N3P4 AGGF1P9-201ENST00000561884 913 ntBASIC7.78□□□□□ -1.16
VPS8Q8N3P4 TVP23CP2-201ENST00000571473 623 ntBASIC7.78□□□□□ -1.16
VPS8Q8N3P4 AL022401.1-201ENST00000619498 108 ntBASIC7.78□□□□□ -1.16
VPS8Q8N3P4 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
VPS8Q8N3P4 AC022417.1-201ENST00000624768 1303 ntBASIC7.78□□□□□ -1.16
VPS8Q8N3P4 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
VPS8Q8N3P4 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
VPS8Q8N3P4 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
VPS8Q8N3P4 ADAM5-202ENST00000399789 1942 ntBASIC7.78□□□□□ -1.16
VPS8Q8N3P4 SNORA5.1-201ENST00000384275 131 ntBASIC7.78□□□□□ -1.16
VPS8Q8N3P4 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC7.78□□□□□ -1.16
VPS8Q8N3P4 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC7.78□□□□□ -1.16
VPS8Q8N3P4 RN7SL244P-201ENST00000493405 297 ntBASIC7.78□□□□□ -1.16
VPS8Q8N3P4 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
VPS8Q8N3P4 MYL12BP2-201ENST00000503948 512 ntBASIC7.78□□□□□ -1.16
VPS8Q8N3P4 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC7.78□□□□□ -1.16
VPS8Q8N3P4 UBE2FP2-201ENST00000566646 462 ntBASIC7.78□□□□□ -1.16
VPS8Q8N3P4 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC7.78□□□□□ -1.16
VPS8Q8N3P4 MIR3667-201ENST00000581025 74 ntBASIC7.78□□□□□ -1.16
VPS8Q8N3P4 AC011487.3-201ENST00000593607 453 ntBASIC7.78□□□□□ -1.16
VPS8Q8N3P4 AL136295.6-201ENST00000610486 658 ntBASIC7.78□□□□□ -1.16
VPS8Q8N3P4 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC7.78□□□□□ -1.16
VPS8Q8N3P4 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.16
VPS8Q8N3P4 LCMT1-AS2-202ENST00000565214 5666 ntBASIC7.77□□□□□ -1.17
VPS8Q8N3P4 AC009643.2-201ENST00000603543 1448 ntBASIC7.77□□□□□ -1.17
VPS8Q8N3P4 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC7.77□□□□□ -1.17
VPS8Q8N3P4 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
VPS8Q8N3P4 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
VPS8Q8N3P4 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC7.77□□□□□ -1.17
VPS8Q8N3P4 BCORP1-203ENST00000513194 5093 ntBASIC7.77□□□□□ -1.17
VPS8Q8N3P4 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
VPS8Q8N3P4 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
VPS8Q8N3P4 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
VPS8Q8N3P4 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
VPS8Q8N3P4 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
VPS8Q8N3P4 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
VPS8Q8N3P4 AL357515.1-201ENST00000402967 542 ntBASIC7.77□□□□□ -1.17
VPS8Q8N3P4 AL645608.4-201ENST00000423619 154 ntBASIC7.77□□□□□ -1.17
VPS8Q8N3P4 CYCSP11-201ENST00000436426 315 ntBASIC7.77□□□□□ -1.17
VPS8Q8N3P4 AC073052.1-201ENST00000440417 714 ntBASIC7.77□□□□□ -1.17
VPS8Q8N3P4 AC004980.3-201ENST00000447046 365 ntBASIC7.77□□□□□ -1.17
VPS8Q8N3P4 SLC25A18P1-201ENST00000449385 454 ntBASIC7.77□□□□□ -1.17
VPS8Q8N3P4 AC063943.1-201ENST00000465434 453 ntBASIC7.77□□□□□ -1.17
VPS8Q8N3P4 AL049874.2-201ENST00000492636 288 ntBASIC7.77□□□□□ -1.17
VPS8Q8N3P4 SCARNA22-201ENST00000503991 125 ntBASIC7.77□□□□□ -1.17
VPS8Q8N3P4 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC7.77□□□□□ -1.17
VPS8Q8N3P4 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC7.77□□□□□ -1.17
VPS8Q8N3P4 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC7.77□□□□□ -1.17
VPS8Q8N3P4 DPPA3P2-201ENST00000553589 478 ntBASIC7.77□□□□□ -1.17
VPS8Q8N3P4 AL391358.1-201ENST00000605342 190 ntBASIC7.77□□□□□ -1.17
VPS8Q8N3P4 MIR7703-201ENST00000620784 77 ntBASIC7.77□□□□□ -1.17
VPS8Q8N3P4 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC7.77□□□□□ -1.17
VPS8Q8N3P4 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC7.77□□□□□ -1.17
VPS8Q8N3P4 BMPR1APS1-201ENST00000403332 1598 ntBASIC7.76□□□□□ -1.17
VPS8Q8N3P4 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
VPS8Q8N3P4 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
VPS8Q8N3P4 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
VPS8Q8N3P4 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
VPS8Q8N3P4 AC099654.2-201ENST00000433031 1980 ntBASIC7.76□□□□□ -1.17
VPS8Q8N3P4 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC7.76□□□□□ -1.17
VPS8Q8N3P4 MED23-203ENST00000368058 4576 ntTSL 5 BASIC7.76□□□□□ -1.17
VPS8Q8N3P4 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC7.76□□□□□ -1.17
VPS8Q8N3P4 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC7.76□□□□□ -1.17
VPS8Q8N3P4 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
VPS8Q8N3P4 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC7.76□□□□□ -1.17
VPS8Q8N3P4 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC7.76□□□□□ -1.17
VPS8Q8N3P4 AC091685.2-201ENST00000454924 864 ntBASIC7.76□□□□□ -1.17
VPS8Q8N3P4 OR7H2P-201ENST00000513483 306 ntBASIC7.76□□□□□ -1.17
VPS8Q8N3P4 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC7.76□□□□□ -1.17
VPS8Q8N3P4 SMG1P6-201ENST00000532337 2930 ntBASIC7.76□□□□□ -1.17
VPS8Q8N3P4 LDHC-203ENST00000535809 757 ntTSL 5 BASIC7.76□□□□□ -1.17
VPS8Q8N3P4 LDHC-205ENST00000537486 583 ntTSL 5 BASIC7.76□□□□□ -1.17
VPS8Q8N3P4 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC7.76□□□□□ -1.17
VPS8Q8N3P4 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC7.76□□□□□ -1.17
VPS8Q8N3P4 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC7.76□□□□□ -1.17
VPS8Q8N3P4 AC019206.1-201ENST00000621938 425 ntBASIC7.76□□□□□ -1.17
VPS8Q8N3P4 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
VPS8Q8N3P4 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
VPS8Q8N3P4 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
VPS8Q8N3P4 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC7.75□□□□□ -1.17
VPS8Q8N3P4 AC008758.3-201ENST00000507003 1829 ntBASIC7.75□□□□□ -1.17
VPS8Q8N3P4 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC7.75□□□□□ -1.17
VPS8Q8N3P4 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
VPS8Q8N3P4 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
VPS8Q8N3P4 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC7.75□□□□□ -1.17
VPS8Q8N3P4 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
VPS8Q8N3P4 AC008072.1-201ENST00000434254 824 ntBASIC7.75□□□□□ -1.17
VPS8Q8N3P4 OR52J1P-201ENST00000450596 932 ntBASIC7.75□□□□□ -1.17
VPS8Q8N3P4 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC7.75□□□□□ -1.17
VPS8Q8N3P4 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC7.75□□□□□ -1.17
VPS8Q8N3P4 MIR4480-201ENST00000582492 71 ntBASIC7.75□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms