Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
DSC1Q08554 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.71□□□□□ -1.5
DSC1Q08554 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
DSC1Q08554 AC112255.1-201ENST00000624070 2493 ntBASIC5.71□□□□□ -1.5
DSC1Q08554 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.71□□□□□ -1.5
DSC1Q08554 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
DSC1Q08554 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
DSC1Q08554 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.71□□□□□ -1.5
DSC1Q08554 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.5
DSC1Q08554 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
DSC1Q08554 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
DSC1Q08554 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
DSC1Q08554 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
DSC1Q08554 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
DSC1Q08554 AC114774.1-201ENST00000507410 1770 ntBASIC5.7□□□□□ -1.5
DSC1Q08554 AC016745.2-201ENST00000608834 3443 ntBASIC5.7□□□□□ -1.5
DSC1Q08554 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
DSC1Q08554 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.7□□□□□ -1.5
DSC1Q08554 AC068446.1-201ENST00000556425 1549 ntBASIC5.7□□□□□ -1.5
DSC1Q08554 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
DSC1Q08554 DNM1P47-203ENST00000571780 12667 ntBASIC5.7□□□□□ -1.5
DSC1Q08554 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
DSC1Q08554 U3.3-201ENST00000362986 216 ntBASIC5.7□□□□□ -1.5
DSC1Q08554 MIR105-1-201ENST00000385222 81 ntBASIC5.7□□□□□ -1.5
DSC1Q08554 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.7□□□□□ -1.5
DSC1Q08554 RNU6-564P-201ENST00000410983 104 ntBASIC5.7□□□□□ -1.5
DSC1Q08554 AC211486.3-201ENST00000412694 621 ntBASIC5.7□□□□□ -1.5
DSC1Q08554 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.7□□□□□ -1.5
DSC1Q08554 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC5.7□□□□□ -1.5
DSC1Q08554 RBMY2KP-201ENST00000418221 992 ntBASIC5.7□□□□□ -1.5
DSC1Q08554 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.7□□□□□ -1.5
DSC1Q08554 AL590623.1-201ENST00000427864 105 ntBASIC5.7□□□□□ -1.5
DSC1Q08554 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.7□□□□□ -1.5
DSC1Q08554 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC5.7□□□□□ -1.5
DSC1Q08554 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.7□□□□□ -1.5
DSC1Q08554 AC073465.2-201ENST00000440938 498 ntBASIC5.7□□□□□ -1.5
DSC1Q08554 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.7□□□□□ -1.5
DSC1Q08554 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.7□□□□□ -1.5
DSC1Q08554 AC092647.2-201ENST00000452998 253 ntBASIC5.7□□□□□ -1.5
DSC1Q08554 DEFB109A-201ENST00000482450 265 ntBASIC5.7□□□□□ -1.5
DSC1Q08554 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
DSC1Q08554 NDUFB5P1-201ENST00000508134 564 ntBASIC5.7□□□□□ -1.5
DSC1Q08554 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.7□□□□□ -1.5
DSC1Q08554 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.7□□□□□ -1.5
DSC1Q08554 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.7□□□□□ -1.5
DSC1Q08554 AC092490.3-201ENST00000545370 572 ntBASIC5.7□□□□□ -1.5
DSC1Q08554 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.7□□□□□ -1.5
DSC1Q08554 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC5.7□□□□□ -1.5
DSC1Q08554 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.7□□□□□ -1.5
DSC1Q08554 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.7□□□□□ -1.5
DSC1Q08554 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
DSC1Q08554 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.7□□□□□ -1.5
DSC1Q08554 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
DSC1Q08554 AC005252.1-201ENST00000604518 1063 ntBASIC5.7□□□□□ -1.5
DSC1Q08554 AC110792.4-201ENST00000609843 298 ntBASIC5.7□□□□□ -1.5
DSC1Q08554 AC117490.2-201ENST00000610042 594 ntBASIC5.7□□□□□ -1.5
DSC1Q08554 Mico1.1-201ENST00000611698 204 ntBASIC5.7□□□□□ -1.5
DSC1Q08554 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.7□□□□□ -1.5
DSC1Q08554 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
DSC1Q08554 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
DSC1Q08554 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
DSC1Q08554 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.7□□□□□ -1.5
DSC1Q08554 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.7□□□□□ -1.5
DSC1Q08554 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
DSC1Q08554 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
DSC1Q08554 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
DSC1Q08554 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
DSC1Q08554 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
DSC1Q08554 AC092747.4-201ENST00000620519 1861 ntBASIC5.69□□□□□ -1.5
DSC1Q08554 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
DSC1Q08554 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.69□□□□□ -1.5
DSC1Q08554 AC103591.2-201ENST00000265259 766 ntBASIC5.69□□□□□ -1.5
DSC1Q08554 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
DSC1Q08554 RNU4-4P-201ENST00000364588 130 ntBASIC5.69□□□□□ -1.5
DSC1Q08554 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.69□□□□□ -1.5
DSC1Q08554 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.69□□□□□ -1.5
DSC1Q08554 HSPA8P15-201ENST00000401676 786 ntBASIC5.69□□□□□ -1.5
DSC1Q08554 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
DSC1Q08554 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
DSC1Q08554 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.69□□□□□ -1.5
DSC1Q08554 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.69□□□□□ -1.5
DSC1Q08554 AC093162.1-201ENST00000419682 124 ntBASIC5.69□□□□□ -1.5
DSC1Q08554 AL354692.1-201ENST00000423044 315 ntBASIC5.69□□□□□ -1.5
DSC1Q08554 EI24P4-201ENST00000423683 1078 ntBASIC5.69□□□□□ -1.5
DSC1Q08554 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.69□□□□□ -1.5
DSC1Q08554 UBE2V1P6-201ENST00000430840 422 ntBASIC5.69□□□□□ -1.5
DSC1Q08554 NDUFA5P1-201ENST00000433858 341 ntBASIC5.69□□□□□ -1.5
DSC1Q08554 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.69□□□□□ -1.5
DSC1Q08554 AC079168.1-201ENST00000458741 345 ntBASIC5.69□□□□□ -1.5
DSC1Q08554 RPL35AP28-201ENST00000459730 331 ntBASIC5.69□□□□□ -1.5
DSC1Q08554 HMGN1P8-201ENST00000463578 288 ntBASIC5.69□□□□□ -1.5
DSC1Q08554 TRBV8-1-201ENST00000481590 279 ntBASIC5.69□□□□□ -1.5
DSC1Q08554 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.69□□□□□ -1.5
DSC1Q08554 GTF2F2P1-201ENST00000511083 675 ntBASIC5.69□□□□□ -1.5
DSC1Q08554 RN7SKP66-201ENST00000516681 231 ntBASIC5.69□□□□□ -1.5
DSC1Q08554 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.69□□□□□ -1.5
DSC1Q08554 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
DSC1Q08554 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.69□□□□□ -1.5
DSC1Q08554 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.69□□□□□ -1.5
DSC1Q08554 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms