Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
PRKDCP78527 NCKAP5-205ENST00000409261 7594 ntAPPRIS P4 TSL 5 BASIC3.49□□□□□ -1.85
PRKDCP78527 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PRKDCP78527 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.49□□□□□ -1.85
PRKDCP78527 OR5P1P-201ENST00000299512 925 ntBASIC3.49□□□□□ -1.85
PRKDCP78527 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.49□□□□□ -1.85
PRKDCP78527 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.49□□□□□ -1.85
PRKDCP78527 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.49□□□□□ -1.85
PRKDCP78527 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC3.49□□□□□ -1.85
PRKDCP78527 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.49□□□□□ -1.85
PRKDCP78527 AL133338.2-201ENST00000604292 736 ntBASIC3.49□□□□□ -1.85
PRKDCP78527 AC011815.3-201ENST00000624194 473 ntBASIC3.49□□□□□ -1.85
PRKDCP78527 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC3.49□□□□□ -1.85
PRKDCP78527 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PRKDCP78527 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.49□□□□□ -1.85
PRKDCP78527 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PRKDCP78527 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
PRKDCP78527 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PRKDCP78527 AP004147.1-201ENST00000505153 6314 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PRKDCP78527 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC3.49□□□□□ -1.85
PRKDCP78527 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PRKDCP78527 MIR589-201ENST00000385238 99 ntBASIC3.49□□□□□ -1.85
PRKDCP78527 RN7SKP33-201ENST00000410942 340 ntBASIC3.49□□□□□ -1.85
PRKDCP78527 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.49□□□□□ -1.85
PRKDCP78527 AL356387.2-201ENST00000422272 243 ntBASIC3.49□□□□□ -1.85
PRKDCP78527 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.49□□□□□ -1.85
PRKDCP78527 RPS17P8-201ENST00000434525 335 ntBASIC3.49□□□□□ -1.85
PRKDCP78527 AC007967.1-201ENST00000455422 1159 ntBASIC3.49□□□□□ -1.85
PRKDCP78527 PRKG1-204ENST00000373985 6487 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PRKDCP78527 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PRKDCP78527 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
PRKDCP78527 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PRKDCP78527 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PRKDCP78527 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
PRKDCP78527 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PRKDCP78527 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
PRKDCP78527 ADAMTS3-201ENST00000286657 6409 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PRKDCP78527 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PRKDCP78527 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PRKDCP78527 RNF10P1-201ENST00000418589 369 ntBASIC3.49□□□□□ -1.85
PRKDCP78527 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.49□□□□□ -1.85
PRKDCP78527 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC3.49□□□□□ -1.85
PRKDCP78527 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC3.49□□□□□ -1.85
PRKDCP78527 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
PRKDCP78527 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
PRKDCP78527 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.49□□□□□ -1.85
PRKDCP78527 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PRKDCP78527 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PRKDCP78527 ANAPC1-201ENST00000341068 8262 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PRKDCP78527 AC005261.4-201ENST00000600047 1385 ntBASIC3.49□□□□□ -1.85
PRKDCP78527 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.48□□□□□ -1.85
PRKDCP78527 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC3.48□□□□□ -1.85
PRKDCP78527 BX323845.1-201ENST00000432417 179 ntBASIC3.48□□□□□ -1.85
PRKDCP78527 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC3.48□□□□□ -1.85
PRKDCP78527 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC3.48□□□□□ -1.85
PRKDCP78527 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.48□□□□□ -1.85
PRKDCP78527 AC007342.8-201ENST00000623278 678 ntBASIC3.48□□□□□ -1.85
PRKDCP78527 AC015908.5-201ENST00000623289 343 ntBASIC3.48□□□□□ -1.85
PRKDCP78527 UGT2B24P-201ENST00000514441 1597 ntBASIC3.48□□□□□ -1.85
PRKDCP78527 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PRKDCP78527 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC3.48□□□□□ -1.85
PRKDCP78527 TNC-210ENST00000535648 7508 ntTSL 5 BASIC3.48□□□□□ -1.85
PRKDCP78527 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.48□□□□□ -1.85
PRKDCP78527 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.48□□□□□ -1.85
PRKDCP78527 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PRKDCP78527 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
PRKDCP78527 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC3.48□□□□□ -1.85
PRKDCP78527 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PRKDCP78527 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC3.48□□□□□ -1.85
PRKDCP78527 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
PRKDCP78527 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
PRKDCP78527 HCG14-201ENST00000444986 413 ntTSL 2 BASIC3.48□□□□□ -1.85
PRKDCP78527 OR5D2P-201ENST00000524390 911 ntBASIC3.48□□□□□ -1.85
PRKDCP78527 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC3.48□□□□□ -1.85
PRKDCP78527 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC3.48□□□□□ -1.85
PRKDCP78527 AL356608.1-201ENST00000610034 820 ntBASIC3.48□□□□□ -1.85
PRKDCP78527 BX005214.3-202ENST00000619809 325 ntBASIC3.48□□□□□ -1.85
PRKDCP78527 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
PRKDCP78527 APBB2-201ENST00000295974 8972 ntAPPRIS ALT1 TSL 2 BASIC3.48□□□□□ -1.85
PRKDCP78527 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC3.48□□□□□ -1.85
PRKDCP78527 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC3.48□□□□□ -1.85
PRKDCP78527 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PRKDCP78527 SEC22B-201ENST00000578049 6922 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PRKDCP78527 ABCA9-202ENST00000453985 6116 ntTSL 5 BASIC3.48□□□□□ -1.85
PRKDCP78527 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC3.48□□□□□ -1.85
PRKDCP78527 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.48□□□□□ -1.85
PRKDCP78527 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
PRKDCP78527 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PRKDCP78527 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PRKDCP78527 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC3.48□□□□□ -1.85
PRKDCP78527 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PRKDCP78527 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PRKDCP78527 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
PRKDCP78527 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
PRKDCP78527 AC091564.1-201ENST00000464563 479 ntBASIC3.48□□□□□ -1.85
PRKDCP78527 AC130364.2-201ENST00000528639 604 ntBASIC3.48□□□□□ -1.85
PRKDCP78527 AL121772.2-201ENST00000614331 297 ntBASIC3.48□□□□□ -1.85
PRKDCP78527 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC3.48□□□□□ -1.85
PRKDCP78527 CEP63-202ENST00000337090 5632 ntAPPRIS P3 TSL 5 BASIC3.48□□□□□ -1.85
PRKDCP78527 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms