Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
ACTBP60709 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ACTBP60709 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
ACTBP60709 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
ACTBP60709 AL359643.1-201ENST00000404109 423 ntBASIC4.56□□□□□ -1.68
ACTBP60709 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
ACTBP60709 AC073136.2-201ENST00000417282 849 ntBASIC4.56□□□□□ -1.68
ACTBP60709 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.56□□□□□ -1.68
ACTBP60709 RPL35AP21-201ENST00000437667 333 ntBASIC4.56□□□□□ -1.68
ACTBP60709 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.56□□□□□ -1.68
ACTBP60709 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC4.56□□□□□ -1.68
ACTBP60709 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.56□□□□□ -1.68
ACTBP60709 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.56□□□□□ -1.68
ACTBP60709 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.56□□□□□ -1.68
ACTBP60709 DNAJB5P1-201ENST00000454004 806 ntBASIC4.56□□□□□ -1.68
ACTBP60709 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.56□□□□□ -1.68
ACTBP60709 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.56□□□□□ -1.68
ACTBP60709 CBX1P5-201ENST00000475330 559 ntBASIC4.56□□□□□ -1.68
ACTBP60709 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC4.56□□□□□ -1.68
ACTBP60709 AC008410.1-201ENST00000483777 339 ntBASIC4.56□□□□□ -1.68
ACTBP60709 RN7SL814P-201ENST00000487715 300 ntBASIC4.56□□□□□ -1.68
ACTBP60709 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.56□□□□□ -1.68
ACTBP60709 HMGB3P16-201ENST00000508037 287 ntBASIC4.56□□□□□ -1.68
ACTBP60709 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.56□□□□□ -1.68
ACTBP60709 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC4.56□□□□□ -1.68
ACTBP60709 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.56□□□□□ -1.68
ACTBP60709 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC4.56□□□□□ -1.68
ACTBP60709 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC4.56□□□□□ -1.68
ACTBP60709 SULT1C2P2-201ENST00000562517 294 ntBASIC4.56□□□□□ -1.68
ACTBP60709 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.56□□□□□ -1.68
ACTBP60709 AC015802.2-201ENST00000589690 189 ntBASIC4.56□□□□□ -1.68
ACTBP60709 AP000769.2-201ENST00000602344 396 ntBASIC4.56□□□□□ -1.68
ACTBP60709 RN7SL544P-201ENST00000617232 284 ntBASIC4.56□□□□□ -1.68
ACTBP60709 RN7SL763P-201ENST00000620922 284 ntBASIC4.56□□□□□ -1.68
ACTBP60709 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
ACTBP60709 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.56□□□□□ -1.68
ACTBP60709 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
ACTBP60709 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.56□□□□□ -1.68
ACTBP60709 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC4.56□□□□□ -1.68
ACTBP60709 AL672167.1-204ENST00000641875 3017 ntBASIC4.56□□□□□ -1.68
ACTBP60709 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.56□□□□□ -1.68
ACTBP60709 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.56□□□□□ -1.68
ACTBP60709 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ACTBP60709 OR55B1P-203ENST00000641518 2602 ntBASIC4.56□□□□□ -1.68
ACTBP60709 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
ACTBP60709 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC4.55□□□□□ -1.68
ACTBP60709 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ACTBP60709 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.55□□□□□ -1.68
ACTBP60709 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.55□□□□□ -1.68
ACTBP60709 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ACTBP60709 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC4.55□□□□□ -1.68
ACTBP60709 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
ACTBP60709 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
ACTBP60709 MIR1271-201ENST00000408537 86 ntBASIC4.55□□□□□ -1.68
ACTBP60709 SLC20A1P1-201ENST00000413906 956 ntBASIC4.55□□□□□ -1.68
ACTBP60709 OR2AH1P-201ENST00000425717 928 ntBASIC4.55□□□□□ -1.68
ACTBP60709 AC127526.2-201ENST00000426436 775 ntBASIC4.55□□□□□ -1.68
ACTBP60709 AL031584.1-201ENST00000447169 754 ntBASIC4.55□□□□□ -1.68
ACTBP60709 MRPL35P2-201ENST00000448009 511 ntBASIC4.55□□□□□ -1.68
ACTBP60709 MTND4LP12-201ENST00000448237 295 ntBASIC4.55□□□□□ -1.68
ACTBP60709 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.55□□□□□ -1.68
ACTBP60709 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.55□□□□□ -1.68
ACTBP60709 AL591473.1-201ENST00000464297 313 ntBASIC4.55□□□□□ -1.68
ACTBP60709 AC092754.1-201ENST00000472975 479 ntBASIC4.55□□□□□ -1.68
ACTBP60709 AC090638.1-201ENST00000498296 909 ntBASIC4.55□□□□□ -1.68
ACTBP60709 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.55□□□□□ -1.68
ACTBP60709 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.55□□□□□ -1.68
ACTBP60709 AC105031.1-201ENST00000518550 476 ntBASIC4.55□□□□□ -1.68
ACTBP60709 IGHVII-60-1-201ENST00000519079 256 ntBASIC4.55□□□□□ -1.68
ACTBP60709 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC4.55□□□□□ -1.68
ACTBP60709 HMGB1P42-201ENST00000532126 553 ntBASIC4.55□□□□□ -1.68
ACTBP60709 NANOGNBP2-201ENST00000544753 553 ntBASIC4.55□□□□□ -1.68
ACTBP60709 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.55□□□□□ -1.68
ACTBP60709 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.55□□□□□ -1.68
ACTBP60709 GNG2-208ENST00000554875 430 ntTSL 5 BASIC4.55□□□□□ -1.68
ACTBP60709 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.55□□□□□ -1.68
ACTBP60709 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC4.55□□□□□ -1.68
ACTBP60709 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC4.55□□□□□ -1.68
ACTBP60709 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.55□□□□□ -1.68
ACTBP60709 NDUFA5P11-201ENST00000567995 343 ntBASIC4.55□□□□□ -1.68
ACTBP60709 AP001496.3-201ENST00000580230 913 ntBASIC4.55□□□□□ -1.68
ACTBP60709 AC018695.5-201ENST00000605872 315 ntBASIC4.55□□□□□ -1.68
ACTBP60709 AL133406.3-201ENST00000606817 541 ntBASIC4.55□□□□□ -1.68
ACTBP60709 AP001962.1-201ENST00000624114 559 ntBASIC4.55□□□□□ -1.68
ACTBP60709 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
ACTBP60709 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
ACTBP60709 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.55□□□□□ -1.68
ACTBP60709 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
ACTBP60709 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.55□□□□□ -1.68
ACTBP60709 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
ACTBP60709 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.55□□□□□ -1.68
ACTBP60709 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.55□□□□□ -1.68
ACTBP60709 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ACTBP60709 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
ACTBP60709 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ACTBP60709 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.54□□□□□ -1.68
ACTBP60709 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.54□□□□□ -1.68
ACTBP60709 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ACTBP60709 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ACTBP60709 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms