Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.05□□□□□ -1.44
NEK3P51956 AC027104.1-201ENST00000563702 681 ntBASIC6.05□□□□□ -1.44
NEK3P51956 AC010735.1-201ENST00000567305 1026 ntBASIC6.05□□□□□ -1.44
NEK3P51956 AC092121.1-201ENST00000569452 202 ntBASIC6.05□□□□□ -1.44
NEK3P51956 MIR4776-2-201ENST00000580204 80 ntBASIC6.05□□□□□ -1.44
NEK3P51956 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NEK3P51956 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.05□□□□□ -1.44
NEK3P51956 AC023813.4-201ENST00000607580 580 ntBASIC6.05□□□□□ -1.44
NEK3P51956 AC124016.2-201ENST00000610058 665 ntBASIC6.05□□□□□ -1.44
NEK3P51956 RNU6-1192P-201ENST00000612197 107 ntBASIC6.05□□□□□ -1.44
NEK3P51956 RNU6-489P-201ENST00000618289 107 ntBASIC6.05□□□□□ -1.44
NEK3P51956 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.05□□□□□ -1.44
NEK3P51956 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC6.05□□□□□ -1.44
NEK3P51956 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
NEK3P51956 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.05□□□□□ -1.44
NEK3P51956 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
NEK3P51956 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NEK3P51956 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
NEK3P51956 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.05□□□□□ -1.44
NEK3P51956 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NEK3P51956 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
NEK3P51956 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NEK3P51956 AC096656.1-201ENST00000623826 1364 ntBASIC6.05□□□□□ -1.44
NEK3P51956 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.05□□□□□ -1.44
NEK3P51956 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC6.05□□□□□ -1.44
NEK3P51956 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NEK3P51956 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NEK3P51956 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.04□□□□□ -1.44
NEK3P51956 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
NEK3P51956 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NEK3P51956 AC027088.4-201ENST00000611559 1947 ntBASIC6.04□□□□□ -1.44
NEK3P51956 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
NEK3P51956 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NEK3P51956 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
NEK3P51956 TMSB4XP2-201ENST00000335179 210 ntBASIC6.04□□□□□ -1.44
NEK3P51956 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NEK3P51956 RN7SKP128-201ENST00000364270 303 ntBASIC6.04□□□□□ -1.44
NEK3P51956 RNA5SP510-201ENST00000364697 99 ntBASIC6.04□□□□□ -1.44
NEK3P51956 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
NEK3P51956 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
NEK3P51956 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
NEK3P51956 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.04□□□□□ -1.44
NEK3P51956 RPL35AP3-201ENST00000414680 288 ntBASIC6.04□□□□□ -1.44
NEK3P51956 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.04□□□□□ -1.44
NEK3P51956 HYALP1-201ENST00000417674 1279 ntBASIC6.04□□□□□ -1.44
NEK3P51956 NMD3P2-201ENST00000421815 761 ntBASIC6.04□□□□□ -1.44
NEK3P51956 PTP4A1P7-201ENST00000423476 514 ntBASIC6.04□□□□□ -1.44
NEK3P51956 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC6.04□□□□□ -1.44
NEK3P51956 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC6.04□□□□□ -1.44
NEK3P51956 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.04□□□□□ -1.44
NEK3P51956 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.04□□□□□ -1.44
NEK3P51956 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC6.04□□□□□ -1.44
NEK3P51956 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC6.04□□□□□ -1.44
NEK3P51956 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.04□□□□□ -1.44
NEK3P51956 RPL7P45-201ENST00000455851 743 ntBASIC6.04□□□□□ -1.44
NEK3P51956 RN7SL269P-201ENST00000467795 305 ntBASIC6.04□□□□□ -1.44
NEK3P51956 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.04□□□□□ -1.44
NEK3P51956 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC6.04□□□□□ -1.44
NEK3P51956 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NEK3P51956 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NEK3P51956 AC010374.2-201ENST00000512933 535 ntBASIC6.04□□□□□ -1.44
NEK3P51956 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.04□□□□□ -1.44
NEK3P51956 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
NEK3P51956 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC6.04□□□□□ -1.44
NEK3P51956 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC6.04□□□□□ -1.44
NEK3P51956 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.04□□□□□ -1.44
NEK3P51956 AC012254.4-201ENST00000588843 273 ntBASIC6.04□□□□□ -1.44
NEK3P51956 AC060780.2-201ENST00000589047 198 ntBASIC6.04□□□□□ -1.44
NEK3P51956 AC008521.2-201ENST00000591021 259 ntBASIC6.04□□□□□ -1.44
NEK3P51956 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.04□□□□□ -1.44
NEK3P51956 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC6.04□□□□□ -1.44
NEK3P51956 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC6.04□□□□□ -1.44
NEK3P51956 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
NEK3P51956 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.04□□□□□ -1.44
NEK3P51956 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.04□□□□□ -1.44
NEK3P51956 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
NEK3P51956 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NEK3P51956 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NEK3P51956 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NEK3P51956 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
NEK3P51956 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
NEK3P51956 AP002512.4-202ENST00000641599 4530 ntBASIC6.04□□□□□ -1.44
NEK3P51956 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC6.03□□□□□ -1.44
NEK3P51956 SEC63P2-201ENST00000503863 1939 ntBASIC6.03□□□□□ -1.44
NEK3P51956 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
NEK3P51956 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.03□□□□□ -1.44
NEK3P51956 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NEK3P51956 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.03□□□□□ -1.44
NEK3P51956 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
NEK3P51956 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
NEK3P51956 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NEK3P51956 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NEK3P51956 VN2R3P-201ENST00000422626 1412 ntBASIC6.03□□□□□ -1.44
NEK3P51956 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC6.03□□□□□ -1.44
NEK3P51956 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NEK3P51956 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
NEK3P51956 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
NEK3P51956 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NEK3P51956 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NEK3P51956 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms