Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.12□□□□□ -1.59
SNX3O60493 BUD31P2-201ENST00000449374 300 ntBASIC5.12□□□□□ -1.59
SNX3O60493 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.12□□□□□ -1.59
SNX3O60493 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.12□□□□□ -1.59
SNX3O60493 AC108751.2-201ENST00000469993 231 ntBASIC5.12□□□□□ -1.59
SNX3O60493 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SNX3O60493 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.12□□□□□ -1.59
SNX3O60493 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.12□□□□□ -1.59
SNX3O60493 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.12□□□□□ -1.59
SNX3O60493 AC006427.1-201ENST00000514359 712 ntBASIC5.12□□□□□ -1.59
SNX3O60493 AC138517.1-201ENST00000515724 568 ntBASIC5.12□□□□□ -1.59
SNX3O60493 RNA5SP340-201ENST00000517132 107 ntBASIC5.12□□□□□ -1.59
SNX3O60493 AC067904.2-201ENST00000517322 1283 ntBASIC5.12□□□□□ -1.59
SNX3O60493 AC005868.1-201ENST00000536421 331 ntBASIC5.12□□□□□ -1.59
SNX3O60493 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.12□□□□□ -1.59
SNX3O60493 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
SNX3O60493 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.12□□□□□ -1.59
SNX3O60493 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5.12□□□□□ -1.59
SNX3O60493 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.12□□□□□ -1.59
SNX3O60493 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.12□□□□□ -1.59
SNX3O60493 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SNX3O60493 AC008814.1-201ENST00000603797 406 ntBASIC5.12□□□□□ -1.59
SNX3O60493 TAS2R6P-201ENST00000605022 826 ntBASIC5.12□□□□□ -1.59
SNX3O60493 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SNX3O60493 AC006213.5-201ENST00000619673 288 ntBASIC5.12□□□□□ -1.59
SNX3O60493 AC020923.1-201ENST00000624021 917 ntBASIC5.12□□□□□ -1.59
SNX3O60493 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC5.12□□□□□ -1.59
SNX3O60493 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SNX3O60493 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SNX3O60493 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SNX3O60493 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SNX3O60493 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
SNX3O60493 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.11□□□□□ -1.59
SNX3O60493 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.11□□□□□ -1.59
SNX3O60493 MUC2-202ENST00000613187 4845 ntBASIC5.11□□□□□ -1.59
SNX3O60493 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SNX3O60493 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SNX3O60493 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
SNX3O60493 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
SNX3O60493 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC5.11□□□□□ -1.59
SNX3O60493 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.11□□□□□ -1.59
SNX3O60493 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SNX3O60493 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.11□□□□□ -1.59
SNX3O60493 PNKDP1-201ENST00000435914 430 ntBASIC5.11□□□□□ -1.59
SNX3O60493 ATP5LP2-201ENST00000440646 311 ntBASIC5.11□□□□□ -1.59
SNX3O60493 PCNPP2-201ENST00000441651 455 ntBASIC5.11□□□□□ -1.59
SNX3O60493 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.11□□□□□ -1.59
SNX3O60493 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
SNX3O60493 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.11□□□□□ -1.59
SNX3O60493 AP002884.1-201ENST00000479691 655 ntBASIC5.11□□□□□ -1.59
SNX3O60493 RPL5P22-201ENST00000480199 884 ntBASIC5.11□□□□□ -1.59
SNX3O60493 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.11□□□□□ -1.59
SNX3O60493 RN7SL423P-201ENST00000486202 304 ntBASIC5.11□□□□□ -1.59
SNX3O60493 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.11□□□□□ -1.59
SNX3O60493 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.11□□□□□ -1.59
SNX3O60493 RN7SKP34-201ENST00000516142 244 ntBASIC5.11□□□□□ -1.59
SNX3O60493 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
SNX3O60493 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.11□□□□□ -1.59
SNX3O60493 IGHVIII-11-1-201ENST00000522733 267 ntBASIC5.11□□□□□ -1.59
SNX3O60493 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SNX3O60493 AP000648.1-201ENST00000529682 397 ntBASIC5.11□□□□□ -1.59
SNX3O60493 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SNX3O60493 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.11□□□□□ -1.59
SNX3O60493 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.11□□□□□ -1.59
SNX3O60493 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.11□□□□□ -1.59
SNX3O60493 AL049830.4-201ENST00000555149 351 ntBASIC5.11□□□□□ -1.59
SNX3O60493 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
SNX3O60493 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.11□□□□□ -1.59
SNX3O60493 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.11□□□□□ -1.59
SNX3O60493 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.11□□□□□ -1.59
SNX3O60493 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.11□□□□□ -1.59
SNX3O60493 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.11□□□□□ -1.59
SNX3O60493 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
SNX3O60493 AL031601.1-201ENST00000605702 394 ntBASIC5.11□□□□□ -1.59
SNX3O60493 AC097505.1-201ENST00000610199 565 ntBASIC5.11□□□□□ -1.59
SNX3O60493 RN7SL544P-201ENST00000617232 284 ntBASIC5.11□□□□□ -1.59
SNX3O60493 AC118658.2-201ENST00000618697 459 ntBASIC5.11□□□□□ -1.59
SNX3O60493 RMST_5.1-201ENST00000618704 126 ntBASIC5.11□□□□□ -1.59
SNX3O60493 AL133370.2-201ENST00000619934 439 ntBASIC5.11□□□□□ -1.59
SNX3O60493 RN7SL763P-201ENST00000620922 284 ntBASIC5.11□□□□□ -1.59
SNX3O60493 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.11□□□□□ -1.59
SNX3O60493 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.11□□□□□ -1.59
SNX3O60493 AC008691.1-209ENST00000642094 814 ntBASIC5.11□□□□□ -1.59
SNX3O60493 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SNX3O60493 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
SNX3O60493 SRRM1P3-201ENST00000426911 2678 ntBASIC5.11□□□□□ -1.59
SNX3O60493 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
SNX3O60493 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.11□□□□□ -1.59
SNX3O60493 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SNX3O60493 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SNX3O60493 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SNX3O60493 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SNX3O60493 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SNX3O60493 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SNX3O60493 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SNX3O60493 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SNX3O60493 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SNX3O60493 RNU4-39P-201ENST00000362455 127 ntBASIC5.1□□□□□ -1.59
SNX3O60493 RNA5SP433-201ENST00000364491 114 ntBASIC5.1□□□□□ -1.59
SNX3O60493 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms