Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
RBFOX3A6NFN3 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC4.12□□□□□ -1.75
RBFOX3A6NFN3 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
RBFOX3A6NFN3 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.12□□□□□ -1.75
RBFOX3A6NFN3 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 HMGB3P7-201ENST00000400214 611 ntBASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 AP000580.1-201ENST00000404439 358 ntBASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 AL096711.1-201ENST00000404780 554 ntBASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 U3.32-201ENST00000408116 212 ntBASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 OR51A6P-201ENST00000418680 1004 ntBASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 AC126120.1-201ENST00000431082 470 ntBASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 RPL12P17-201ENST00000432393 498 ntBASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 AL138899.2-201ENST00000439139 499 ntBASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 RPL5P7-201ENST00000444235 813 ntBASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 AC005077.1-201ENST00000449226 375 ntBASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 RN7SL515P-201ENST00000463999 297 ntBASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 AC098847.1-201ENST00000473094 348 ntBASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 AL158068.1-201ENST00000506116 616 ntBASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 AC021146.3-201ENST00000511911 260 ntBASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 AC006530.1-201ENST00000555980 571 ntBASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 AC026826.3-201ENST00000561747 158 ntBASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 RN7SL176P-201ENST00000580352 264 ntBASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 MIR4701-201ENST00000583094 63 ntBASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 AC079315.1-201ENST00000602952 623 ntBASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 uc_338.18-201ENST00000615451 175 ntBASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 AL121890.2-201ENST00000617644 465 ntBASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 AC022919.1-201ENST00000624979 626 ntBASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 AC138627.1-204ENST00000641894 765 ntBASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 Z95327.2-201ENST00000414579 1873 ntBASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 QRSL1P1-201ENST00000400977 1540 ntBASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 AC120338.1-201ENST00000625074 1541 ntBASIC4.11□□□□□ -1.75
RBFOX3A6NFN3 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 RNU1-94P-201ENST00000362627 173 ntBASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 MIR551A-201ENST00000385042 96 ntBASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 RN7SKP247-201ENST00000411094 308 ntBASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 CYCSP10-201ENST00000417973 294 ntBASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 AC115283.1-201ENST00000427353 400 ntBASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 AC009238.2-201ENST00000431026 355 ntBASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 AC069154.1-201ENST00000432914 542 ntBASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 PCNPP2-201ENST00000441651 455 ntBASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.1□□□□□ -1.75
RBFOX3A6NFN3 NPM1P39-201ENST00000449818 867 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms