Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.55□□□□□ -1.36
CCDC66A2RUB6 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC66A2RUB6 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC6.55□□□□□ -1.36
CCDC66A2RUB6 MTCO1P47-201ENST00000523889 1271 ntBASIC6.55□□□□□ -1.36
CCDC66A2RUB6 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.55□□□□□ -1.36
CCDC66A2RUB6 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC6.55□□□□□ -1.36
CCDC66A2RUB6 AP001804.2-201ENST00000533932 910 ntBASIC6.55□□□□□ -1.36
CCDC66A2RUB6 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC66A2RUB6 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC66A2RUB6 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.55□□□□□ -1.36
CCDC66A2RUB6 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.55□□□□□ -1.36
CCDC66A2RUB6 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC66A2RUB6 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.55□□□□□ -1.36
CCDC66A2RUB6 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC6.55□□□□□ -1.36
CCDC66A2RUB6 AC090826.1-203ENST00000569235 490 ntBASIC6.55□□□□□ -1.36
CCDC66A2RUB6 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC6.55□□□□□ -1.36
CCDC66A2RUB6 AC024267.2-201ENST00000582737 417 ntBASIC6.55□□□□□ -1.36
CCDC66A2RUB6 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.55□□□□□ -1.36
CCDC66A2RUB6 AL109653.1-201ENST00000603091 248 ntBASIC6.55□□□□□ -1.36
CCDC66A2RUB6 AL359091.1-201ENST00000449048 1734 ntBASIC6.55□□□□□ -1.36
CCDC66A2RUB6 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC6.55□□□□□ -1.36
CCDC66A2RUB6 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.55□□□□□ -1.36
CCDC66A2RUB6 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
CCDC66A2RUB6 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC6.55□□□□□ -1.36
CCDC66A2RUB6 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC66A2RUB6 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.55□□□□□ -1.36
CCDC66A2RUB6 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC6.55□□□□□ -1.36
CCDC66A2RUB6 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC66A2RUB6 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC66A2RUB6 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC66A2RUB6 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC66A2RUB6 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC66A2RUB6 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC66A2RUB6 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC66A2RUB6 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC66A2RUB6 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC66A2RUB6 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC66A2RUB6 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC66A2RUB6 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC66A2RUB6 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC66A2RUB6 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
CCDC66A2RUB6 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
CCDC66A2RUB6 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC66A2RUB6 Y_RNA.472-201ENST00000384322 102 ntBASIC6.54□□□□□ -1.36
CCDC66A2RUB6 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC66A2RUB6 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC66A2RUB6 AC023128.2-201ENST00000420880 1223 ntBASIC6.54□□□□□ -1.36
CCDC66A2RUB6 RPS4XP16-201ENST00000427198 791 ntBASIC6.54□□□□□ -1.36
CCDC66A2RUB6 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC66A2RUB6 AL645939.3-201ENST00000435408 225 ntBASIC6.54□□□□□ -1.36
CCDC66A2RUB6 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC66A2RUB6 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC66A2RUB6 RPEP4-201ENST00000437636 602 ntBASIC6.54□□□□□ -1.36
CCDC66A2RUB6 MED28P3-201ENST00000444288 531 ntBASIC6.54□□□□□ -1.36
CCDC66A2RUB6 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC66A2RUB6 OTX2P1-201ENST00000450956 354 ntBASIC6.54□□□□□ -1.36
CCDC66A2RUB6 ART2BP-201ENST00000453501 499 ntBASIC6.54□□□□□ -1.36
CCDC66A2RUB6 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC66A2RUB6 RPS20P4-201ENST00000461659 355 ntBASIC6.54□□□□□ -1.36
CCDC66A2RUB6 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC66A2RUB6 RN7SL413P-201ENST00000482700 297 ntBASIC6.54□□□□□ -1.36
CCDC66A2RUB6 RPL9P15-201ENST00000491096 532 ntBASIC6.54□□□□□ -1.36
CCDC66A2RUB6 SNRPCP11-201ENST00000492453 205 ntBASIC6.54□□□□□ -1.36
CCDC66A2RUB6 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC66A2RUB6 MTCYBP19-201ENST00000517463 1124 ntBASIC6.54□□□□□ -1.36
CCDC66A2RUB6 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC66A2RUB6 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
CCDC66A2RUB6 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC66A2RUB6 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
CCDC66A2RUB6 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC66A2RUB6 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC66A2RUB6 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC66A2RUB6 GARSP1-201ENST00000570895 719 ntBASIC6.54□□□□□ -1.36
CCDC66A2RUB6 MTCYBP33-201ENST00000575007 1130 ntBASIC6.54□□□□□ -1.36
CCDC66A2RUB6 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC66A2RUB6 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC66A2RUB6 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC66A2RUB6 AC069366.1-201ENST00000583159 838 ntBASIC6.54□□□□□ -1.36
CCDC66A2RUB6 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC66A2RUB6 AC004890.3-201ENST00000605566 1095 ntBASIC6.54□□□□□ -1.36
CCDC66A2RUB6 SNORA74.4-201ENST00000607595 199 ntBASIC6.54□□□□□ -1.36
CCDC66A2RUB6 AL589743.6-201ENST00000611025 117 ntBASIC6.54□□□□□ -1.36
CCDC66A2RUB6 AL138478.1-201ENST00000612252 832 ntBASIC6.54□□□□□ -1.36
CCDC66A2RUB6 AC092140.2-201ENST00000618027 521 ntBASIC6.54□□□□□ -1.36
CCDC66A2RUB6 CLUHP10-201ENST00000631979 980 ntBASIC6.54□□□□□ -1.36
CCDC66A2RUB6 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC66A2RUB6 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC66A2RUB6 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC66A2RUB6 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC66A2RUB6 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC66A2RUB6 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC66A2RUB6 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC66A2RUB6 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC66A2RUB6 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC66A2RUB6 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC66A2RUB6 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.53□□□□□ -1.36
CCDC66A2RUB6 FANCD2P2-201ENST00000437591 1400 ntBASIC6.53□□□□□ -1.36
CCDC66A2RUB6 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
CCDC66A2RUB6 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
CCDC66A2RUB6 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms