Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 EXOSC3P2-201ENST00000594464 497 ntBASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 AL592436.1-201ENST00000605135 558 ntBASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 RN7SL778P-201ENST00000607160 297 ntBASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 AL157713.1-201ENST00000379752 1531 ntBASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 SAMMSON-222ENST00000641901 2727 ntBASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 AL138756.1-201ENST00000563434 4488 ntTSL 2 BASIC9.65□□□□□ -0.87
TRIM35Q9UPQ4 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
TRIM35Q9UPQ4 LINC02177-201ENST00000564305 5298 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
TRIM35Q9UPQ4 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC9.65□□□□□ -0.87
TRIM35Q9UPQ4 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.87
TRIM35Q9UPQ4 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC9.65□□□□□ -0.87
TRIM35Q9UPQ4 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 LINC01060-204ENST00000510832 2435 ntTSL 2 BASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 DHFR2-202ENST00000394221 4038 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 AL445231.1-201ENST00000445523 1814 ntTSL 2 BASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 TRIM51HP-202ENST00000530412 1823 ntBASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 ELF5-201ENST00000257832 2321 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 ROBO2-201ENST00000332191 5437 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 Y_RNA.159-201ENST00000363674 87 ntBASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 Y_RNA.187-201ENST00000363918 113 ntBASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 PRELID1P2-201ENST00000407805 396 ntBASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 PPIL1P1-201ENST00000423936 499 ntBASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 DBIL5P2-201ENST00000443827 253 ntBASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 AC007967.1-201ENST00000455422 1159 ntBASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 PPP1R2P5-201ENST00000457256 603 ntBASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 RPS27AP17-201ENST00000463344 455 ntBASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 GAPDHP39-201ENST00000481866 979 ntBASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 RPS3AP50-201ENST00000487064 803 ntBASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 RN7SKP295-201ENST00000517264 153 ntBASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 AC073539.2-201ENST00000597113 165 ntBASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 AL596327.1-201ENST00000603629 213 ntBASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 CR382285.1-202ENST00000604687 547 ntBASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 PRR13P7-201ENST00000605538 430 ntBASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 AC100812.1-201ENST00000607622 580 ntBASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 AC079597.1-201ENST00000624306 508 ntBASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 OR7E122P-202ENST00000641144 6171 ntBASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 AC138207.6-201ENST00000579164 1967 ntBASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 AC114546.3-201ENST00000623582 1734 ntBASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
TRIM35Q9UPQ4 VPS13D-212ENST00000543766 3838 ntTSL 2 BASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 JAZF1-201ENST00000283928 3125 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 GOT2P1-201ENST00000440922 1309 ntBASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 AP003972.1-201ENST00000625192 5446 ntBASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 AC073343.1-201ENST00000328239 651 ntBASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 OR10R3P-201ENST00000361688 942 ntBASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 RN7SKP174-201ENST00000363803 330 ntBASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 SNORA69-201ENST00000383895 132 ntBASIC9.63□□□□□ -0.87
TRIM35Q9UPQ4 RNU1-39P-201ENST00000383897 165 ntBASIC9.63□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms