Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 AP005131.7-201ENST00000610087 611 ntBASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 AL356274.1-201ENST00000617064 410 ntBASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 AC109583.2-201ENST00000617367 129 ntBASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 AP003400.3-201ENST00000624904 346 ntBASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 CASC19-248ENST00000641674 1356 ntBASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 NXF4-202ENST00000416098 1465 ntBASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 AL078621.3-201ENST00000623707 2042 ntBASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 DNM1P47-203ENST00000571780 12667 ntBASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 AP002512.4-202ENST00000641599 4530 ntBASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 DDX6P1-205ENST00000441966 1436 ntBASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 NAP1L4P2-201ENST00000425958 899 ntBASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 AC006455.6-201ENST00000426192 893 ntBASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 AL391987.1-201ENST00000441025 200 ntBASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 AL353898.1-201ENST00000444055 238 ntBASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 GAPDHP25-201ENST00000447061 1001 ntBASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 RPS26P41-201ENST00000450370 284 ntBASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 RN7SL51P-201ENST00000468230 285 ntBASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 RN7SL101P-201ENST00000496350 279 ntBASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 AC104109.1-201ENST00000498563 436 ntBASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 RPEP1-201ENST00000504507 658 ntBASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 RNA5SP373-201ENST00000517271 95 ntBASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 AC092709.1-201ENST00000521355 1045 ntBASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 AP002373.2-201ENST00000541631 1060 ntBASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 AC126177.5-201ENST00000549599 178 ntBASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 CD24P2-201ENST00000565486 219 ntBASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 AC003001.2-201ENST00000616294 831 ntBASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 AC021106.3-201ENST00000623925 531 ntBASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
BLOC1S4Q9NUP1 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 AC027228.2-201ENST00000567141 2154 ntBASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 RNU1-77P-201ENST00000390868 162 ntBASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 CCNB2P1-201ENST00000399411 1150 ntBASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 SNORA11.3-201ENST00000408471 128 ntBASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 AL390774.1-201ENST00000411924 246 ntBASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 AL513325.1-201ENST00000417716 1034 ntBASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 RPA2P2-201ENST00000419698 796 ntBASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 RPL7AP49-201ENST00000429522 581 ntBASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 RPL5P2-201ENST00000429598 854 ntBASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 AL591438.1-201ENST00000433508 581 ntBASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 CYCSP12-201ENST00000437729 300 ntBASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 MTCYBP12-201ENST00000440559 1134 ntBASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 AC020779.1-201ENST00000478757 796 ntBASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 AC037198.2-201ENST00000478845 733 ntBASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 HMGB1P3-201ENST00000502802 616 ntBASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.99□□□□□ -1.45
BLOC1S4Q9NUP1 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms