Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
AP1S3Q96PC3 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC3.91□□□□□ -1.78
AP1S3Q96PC3 OR11H3P-201ENST00000554547 982 ntBASIC3.91□□□□□ -1.78
AP1S3Q96PC3 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC3.91□□□□□ -1.78
AP1S3Q96PC3 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC3.91□□□□□ -1.78
AP1S3Q96PC3 CYCSP38-201ENST00000559840 322 ntBASIC3.91□□□□□ -1.78
AP1S3Q96PC3 AP005403.1-201ENST00000579720 229 ntBASIC3.91□□□□□ -1.78
AP1S3Q96PC3 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC3.91□□□□□ -1.78
AP1S3Q96PC3 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC3.91□□□□□ -1.78
AP1S3Q96PC3 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC3.91□□□□□ -1.78
AP1S3Q96PC3 AP000769.2-201ENST00000602344 396 ntBASIC3.91□□□□□ -1.78
AP1S3Q96PC3 IGLCOR22-2-201ENST00000605398 313 ntBASIC3.91□□□□□ -1.78
AP1S3Q96PC3 AC091167.5-201ENST00000605689 894 ntBASIC3.91□□□□□ -1.78
AP1S3Q96PC3 AL133406.3-201ENST00000606817 541 ntBASIC3.91□□□□□ -1.78
AP1S3Q96PC3 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC3.91□□□□□ -1.78
AP1S3Q96PC3 AC079298.2-201ENST00000623885 459 ntBASIC3.91□□□□□ -1.78
AP1S3Q96PC3 AC135068.5-201ENST00000624197 983 ntBASIC3.91□□□□□ -1.78
AP1S3Q96PC3 AP003400.3-201ENST00000624904 346 ntBASIC3.91□□□□□ -1.78
AP1S3Q96PC3 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC3.91□□□□□ -1.78
AP1S3Q96PC3 MAPK10-303ENST00000641324 3959 ntBASIC3.91□□□□□ -1.78
AP1S3Q96PC3 OR8G3P-202ENST00000641572 1255 ntBASIC3.91□□□□□ -1.78
AP1S3Q96PC3 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC3.91□□□□□ -1.78
AP1S3Q96PC3 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
AP1S3Q96PC3 AFP-201ENST00000226359 1914 ntTSL 5 BASIC3.91□□□□□ -1.78
AP1S3Q96PC3 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC3.91□□□□□ -1.78
AP1S3Q96PC3 Z82217.1-201ENST00000625157 8149 ntBASIC3.91□□□□□ -1.78
AP1S3Q96PC3 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC3.91□□□□□ -1.78
AP1S3Q96PC3 AC104966.1-201ENST00000467010 1464 ntBASIC3.91□□□□□ -1.78
AP1S3Q96PC3 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
AP1S3Q96PC3 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
AP1S3Q96PC3 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
AP1S3Q96PC3 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC3.91□□□□□ -1.78
AP1S3Q96PC3 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
AP1S3Q96PC3 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
AP1S3Q96PC3 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.9□□□□□ -1.78
AP1S3Q96PC3 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
AP1S3Q96PC3 DLD-204ENST00000437604 1859 ntTSL 2 BASIC3.9□□□□□ -1.78
AP1S3Q96PC3 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC3.9□□□□□ -1.78
AP1S3Q96PC3 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
AP1S3Q96PC3 OR51C1P-202ENST00000641159 1444 ntBASIC3.9□□□□□ -1.78
AP1S3Q96PC3 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC3.9□□□□□ -1.79
AP1S3Q96PC3 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
AP1S3Q96PC3 RN7SKP6-201ENST00000364795 319 ntBASIC3.9□□□□□ -1.79
AP1S3Q96PC3 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
AP1S3Q96PC3 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
AP1S3Q96PC3 OR7E101P-201ENST00000400428 513 ntBASIC3.9□□□□□ -1.79
AP1S3Q96PC3 EIF4A1P1-201ENST00000420241 934 ntBASIC3.9□□□□□ -1.79
AP1S3Q96PC3 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC3.9□□□□□ -1.79
AP1S3Q96PC3 HMGB3P24-201ENST00000433260 622 ntBASIC3.9□□□□□ -1.79
AP1S3Q96PC3 NDUFS5P5-201ENST00000437256 321 ntBASIC3.9□□□□□ -1.79
AP1S3Q96PC3 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC3.9□□□□□ -1.79
AP1S3Q96PC3 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC3.9□□□□□ -1.79
AP1S3Q96PC3 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC3.9□□□□□ -1.79
AP1S3Q96PC3 AL672138.1-201ENST00000450604 1015 ntBASIC3.9□□□□□ -1.79
AP1S3Q96PC3 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
AP1S3Q96PC3 RBBP4P1-201ENST00000502424 1276 ntBASIC3.9□□□□□ -1.79
AP1S3Q96PC3 AC106822.1-201ENST00000502647 526 ntBASIC3.9□□□□□ -1.79
AP1S3Q96PC3 LSM3P4-201ENST00000502948 309 ntBASIC3.9□□□□□ -1.79
AP1S3Q96PC3 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC3.9□□□□□ -1.79
AP1S3Q96PC3 RNA5SP464-201ENST00000516251 108 ntBASIC3.9□□□□□ -1.79
AP1S3Q96PC3 AP000648.1-201ENST00000529682 397 ntBASIC3.9□□□□□ -1.79
AP1S3Q96PC3 OR8G3P-201ENST00000533406 921 ntBASIC3.9□□□□□ -1.79
AP1S3Q96PC3 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
AP1S3Q96PC3 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC3.9□□□□□ -1.79
AP1S3Q96PC3 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC3.9□□□□□ -1.79
AP1S3Q96PC3 AC022884.2-201ENST00000578535 580 ntBASIC3.9□□□□□ -1.79
AP1S3Q96PC3 RN7SL176P-201ENST00000580352 264 ntBASIC3.9□□□□□ -1.79
AP1S3Q96PC3 AL031601.1-201ENST00000605702 394 ntBASIC3.9□□□□□ -1.79
AP1S3Q96PC3 MIR6774-201ENST00000614651 70 ntBASIC3.9□□□□□ -1.79
AP1S3Q96PC3 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.9□□□□□ -1.79
AP1S3Q96PC3 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
AP1S3Q96PC3 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC3.9□□□□□ -1.79
AP1S3Q96PC3 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
AP1S3Q96PC3 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
AP1S3Q96PC3 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
AP1S3Q96PC3 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
AP1S3Q96PC3 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
AP1S3Q96PC3 AC245100.2-201ENST00000454544 1679 ntBASIC3.9□□□□□ -1.79
AP1S3Q96PC3 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
AP1S3Q96PC3 EEF1A1P21-201ENST00000512363 1344 ntBASIC3.9□□□□□ -1.79
AP1S3Q96PC3 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC3.9□□□□□ -1.79
AP1S3Q96PC3 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
AP1S3Q96PC3 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
AP1S3Q96PC3 TLK1P1-201ENST00000456760 2440 ntBASIC3.9□□□□□ -1.79
AP1S3Q96PC3 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC3.9□□□□□ -1.79
AP1S3Q96PC3 BCLAF1P2-201ENST00000624956 2609 ntBASIC3.9□□□□□ -1.79
AP1S3Q96PC3 NEPNP-201ENST00000404786 1371 ntBASIC3.89□□□□□ -1.79
AP1S3Q96PC3 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC3.89□□□□□ -1.79
AP1S3Q96PC3 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC3.89□□□□□ -1.79
AP1S3Q96PC3 AC023421.1-201ENST00000590535 1785 ntBASIC3.89□□□□□ -1.79
AP1S3Q96PC3 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
AP1S3Q96PC3 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
AP1S3Q96PC3 OR52B1P-201ENST00000316506 909 ntBASIC3.89□□□□□ -1.79
AP1S3Q96PC3 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
AP1S3Q96PC3 RNA5SP28-201ENST00000363841 119 ntBASIC3.89□□□□□ -1.79
AP1S3Q96PC3 RNA5SP232-201ENST00000364144 119 ntBASIC3.89□□□□□ -1.79
AP1S3Q96PC3 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC3.89□□□□□ -1.79
AP1S3Q96PC3 AL121834.1-202ENST00000404494 277 ntBASIC3.89□□□□□ -1.79
AP1S3Q96PC3 GAPDHP42-201ENST00000406848 981 ntBASIC3.89□□□□□ -1.79
AP1S3Q96PC3 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms