Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC093716.1-201ENST00000435923 377 ntBASIC5.73□□□□□ -1.49
HMGB4Q8WW32 CYCSP12-201ENST00000437729 300 ntBASIC5.73□□□□□ -1.49
HMGB4Q8WW32 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.73□□□□□ -1.49
HMGB4Q8WW32 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.73□□□□□ -1.49
HMGB4Q8WW32 RPL7P55-201ENST00000450522 746 ntBASIC5.73□□□□□ -1.49
HMGB4Q8WW32 AL450023.1-201ENST00000450868 751 ntBASIC5.73□□□□□ -1.49
HMGB4Q8WW32 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.73□□□□□ -1.49
HMGB4Q8WW32 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.73□□□□□ -1.49
HMGB4Q8WW32 AC074255.1-201ENST00000511259 501 ntBASIC5.73□□□□□ -1.49
HMGB4Q8WW32 RN7SKP99-201ENST00000517028 307 ntBASIC5.73□□□□□ -1.49
HMGB4Q8WW32 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.73□□□□□ -1.49
HMGB4Q8WW32 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.73□□□□□ -1.49
HMGB4Q8WW32 AC104115.2-201ENST00000523026 687 ntBASIC5.73□□□□□ -1.49
HMGB4Q8WW32 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.73□□□□□ -1.49
HMGB4Q8WW32 DHFRP1-201ENST00000579682 559 ntBASIC5.73□□□□□ -1.49
HMGB4Q8WW32 SNORD39.2-201ENST00000579995 76 ntBASIC5.73□□□□□ -1.49
HMGB4Q8WW32 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.73□□□□□ -1.49
HMGB4Q8WW32 AP005229.2-201ENST00000609980 697 ntBASIC5.73□□□□□ -1.49
HMGB4Q8WW32 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.73□□□□□ -1.49
HMGB4Q8WW32 MIR7155-201ENST00000615925 56 ntBASIC5.73□□□□□ -1.49
HMGB4Q8WW32 AP003476.1-201ENST00000623984 516 ntBASIC5.73□□□□□ -1.49
HMGB4Q8WW32 AC004808.1-201ENST00000627671 721 ntBASIC5.73□□□□□ -1.49
HMGB4Q8WW32 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.73□□□□□ -1.49
HMGB4Q8WW32 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMGB4Q8WW32 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HMGB4Q8WW32 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.73□□□□□ -1.49
HMGB4Q8WW32 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
HMGB4Q8WW32 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.73□□□□□ -1.49
HMGB4Q8WW32 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HMGB4Q8WW32 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMGB4Q8WW32 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.73□□□□□ -1.49
HMGB4Q8WW32 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HMGB4Q8WW32 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMGB4Q8WW32 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMGB4Q8WW32 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.72□□□□□ -1.49
HMGB4Q8WW32 AC005225.5-201ENST00000623547 2225 ntBASIC5.72□□□□□ -1.49
HMGB4Q8WW32 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
HMGB4Q8WW32 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
HMGB4Q8WW32 AL161912.4-201ENST00000623889 2468 ntBASIC5.72□□□□□ -1.49
HMGB4Q8WW32 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HMGB4Q8WW32 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMGB4Q8WW32 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMGB4Q8WW32 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMGB4Q8WW32 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMGB4Q8WW32 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMGB4Q8WW32 AC068769.1-201ENST00000474767 2426 ntBASIC5.72□□□□□ -1.49
HMGB4Q8WW32 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMGB4Q8WW32 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HMGB4Q8WW32 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.72□□□□□ -1.49
HMGB4Q8WW32 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMGB4Q8WW32 MT-TP-201ENST00000387461 68 ntBASIC5.72□□□□□ -1.49
HMGB4Q8WW32 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HMGB4Q8WW32 RNU1-77P-201ENST00000390868 162 ntBASIC5.72□□□□□ -1.49
HMGB4Q8WW32 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.72□□□□□ -1.49
HMGB4Q8WW32 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.72□□□□□ -1.49
HMGB4Q8WW32 AC116036.1-201ENST00000412199 367 ntBASIC5.72□□□□□ -1.49
HMGB4Q8WW32 MTND4P11-201ENST00000417020 1058 ntBASIC5.72□□□□□ -1.49
HMGB4Q8WW32 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.72□□□□□ -1.49
HMGB4Q8WW32 SFR1P2-201ENST00000421841 730 ntBASIC5.72□□□□□ -1.49
HMGB4Q8WW32 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.72□□□□□ -1.49
HMGB4Q8WW32 AC019185.1-201ENST00000442718 389 ntBASIC5.72□□□□□ -1.49
HMGB4Q8WW32 AURKAPS1-201ENST00000451805 1212 ntBASIC5.72□□□□□ -1.49
HMGB4Q8WW32 AC004129.2-201ENST00000457229 287 ntBASIC5.72□□□□□ -1.49
HMGB4Q8WW32 RN7SL172P-201ENST00000460535 303 ntBASIC5.72□□□□□ -1.49
HMGB4Q8WW32 AC005532.2-201ENST00000467154 373 ntBASIC5.72□□□□□ -1.49
HMGB4Q8WW32 CYCSP20-201ENST00000473154 315 ntBASIC5.72□□□□□ -1.49
HMGB4Q8WW32 AC079080.1-201ENST00000479841 822 ntBASIC5.72□□□□□ -1.49
HMGB4Q8WW32 AC073610.1-201ENST00000489971 396 ntBASIC5.72□□□□□ -1.49
HMGB4Q8WW32 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMGB4Q8WW32 PPM1AP1-201ENST00000502740 1135 ntBASIC5.72□□□□□ -1.49
HMGB4Q8WW32 NDUFA5P12-201ENST00000503796 343 ntBASIC5.72□□□□□ -1.49
HMGB4Q8WW32 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC5.72□□□□□ -1.49
HMGB4Q8WW32 RPSAP73-201ENST00000614820 330 ntBASIC5.72□□□□□ -1.49
HMGB4Q8WW32 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.72□□□□□ -1.49
HMGB4Q8WW32 AC007275.1-201ENST00000621243 671 ntBASIC5.72□□□□□ -1.49
HMGB4Q8WW32 CASC19-222ENST00000641321 1173 ntBASIC5.72□□□□□ -1.49
HMGB4Q8WW32 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMGB4Q8WW32 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
HMGB4Q8WW32 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
HMGB4Q8WW32 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.72□□□□□ -1.49
HMGB4Q8WW32 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMGB4Q8WW32 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.72□□□□□ -1.49
HMGB4Q8WW32 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMGB4Q8WW32 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMGB4Q8WW32 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMGB4Q8WW32 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
HMGB4Q8WW32 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMGB4Q8WW32 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.72□□□□□ -1.49
HMGB4Q8WW32 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
HMGB4Q8WW32 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
HMGB4Q8WW32 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HMGB4Q8WW32 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HMGB4Q8WW32 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
HMGB4Q8WW32 AC007342.5-201ENST00000571340 2142 ntBASIC5.71□□□□□ -1.5
HMGB4Q8WW32 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HMGB4Q8WW32 AC015799.1-201ENST00000622996 3122 ntBASIC5.71□□□□□ -1.5
HMGB4Q8WW32 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HMGB4Q8WW32 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.71□□□□□ -1.5
HMGB4Q8WW32 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.71□□□□□ -1.5
HMGB4Q8WW32 RNA5SP30-201ENST00000365552 115 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms