Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 CRYGGP-201ENST00000443337 145 ntBASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 POU5F1P5-201ENST00000445059 658 ntBASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 HMGB1P48-201ENST00000446155 598 ntBASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 COX4I1P2-201ENST00000447446 547 ntBASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 AL121769.1-201ENST00000469473 401 ntBASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 AC037198.2-201ENST00000478845 733 ntBASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 AC068522.1-201ENST00000482895 345 ntBASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 RN7SL362P-201ENST00000494228 267 ntBASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 AC018645.1-201ENST00000505003 109 ntBASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 MAST4-IT1-201ENST00000514241 658 ntBASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 RNU6-506P-201ENST00000516553 94 ntBASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 AC012435.1-202ENST00000568772 240 ntBASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 AC004805.3-201ENST00000603178 310 ntBASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 AL354760.1-201ENST00000608357 643 ntBASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 AL159169.2-201ENST00000610061 1269 ntBASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 MIR6778-201ENST00000617912 73 ntBASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 AC009704.2-201ENST00000618739 483 ntBASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 AC015660.5-201ENST00000623238 564 ntBASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 AL157786.1-207ENST00000627771 695 ntBASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 MIR1910-201ENST00000636955 80 ntBASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 AL132640.2-201ENST00000559968 1698 ntBASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 SFTPD-AS1-201ENST00000608229 5001 ntBASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 MTND4P12-201ENST00000498999 1377 ntBASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SHKBP1Q8TBC3 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 UG0898H09-202ENST00000623646 7040 ntBASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 RNA5SP65-201ENST00000363166 119 ntBASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 AC003045.1-201ENST00000398779 713 ntBASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 AL590002.1-201ENST00000406554 418 ntBASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 MIR1282-201ENST00000408865 101 ntBASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 RNU2-65P-201ENST00000410162 185 ntBASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 RNA5SP115-201ENST00000411160 107 ntBASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 ARPC3P1-201ENST00000437218 533 ntBASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 SULT1D1P-201ENST00000458020 882 ntBASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 RN7SL552P-201ENST00000462094 276 ntBASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 AC095057.1-201ENST00000507583 168 ntBASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 AC117522.3-201ENST00000507974 584 ntBASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 AC096754.1-201ENST00000508904 818 ntBASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 RNA5SP441-201ENST00000516809 88 ntBASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC6.91□□□□□ -1.3
SHKBP1Q8TBC3 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms