Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC7.67□□□□□ -1.18
NEDD1Q8NHV4 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC7.67□□□□□ -1.18
NEDD1Q8NHV4 AL049634.3-201ENST00000604968 457 ntBASIC7.67□□□□□ -1.18
NEDD1Q8NHV4 AL365204.3-201ENST00000612448 685 ntBASIC7.67□□□□□ -1.18
NEDD1Q8NHV4 AP001264.1-201ENST00000620602 703 ntBASIC7.67□□□□□ -1.18
NEDD1Q8NHV4 AC112487.2-201ENST00000637950 304 ntBASIC7.67□□□□□ -1.18
NEDD1Q8NHV4 FAM157B-203ENST00000639350 358 ntBASIC7.67□□□□□ -1.18
NEDD1Q8NHV4 AC010325.3-201ENST00000641084 394 ntBASIC7.67□□□□□ -1.18
NEDD1Q8NHV4 AL137918.1-201ENST00000624542 1922 ntBASIC7.67□□□□□ -1.18
NEDD1Q8NHV4 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NEDD1Q8NHV4 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC7.67□□□□□ -1.18
NEDD1Q8NHV4 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC7.67□□□□□ -1.18
NEDD1Q8NHV4 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NEDD1Q8NHV4 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NEDD1Q8NHV4 AC066616.2-201ENST00000559334 1481 ntBASIC7.67□□□□□ -1.18
NEDD1Q8NHV4 AC023245.2-201ENST00000530760 2978 ntBASIC7.67□□□□□ -1.18
NEDD1Q8NHV4 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NEDD1Q8NHV4 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NEDD1Q8NHV4 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NEDD1Q8NHV4 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
NEDD1Q8NHV4 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC7.67□□□□□ -1.18
NEDD1Q8NHV4 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 AL139384.2-201ENST00000613809 3590 ntBASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 RNFT1P3-201ENST00000340898 1052 ntBASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 RNU6-236P-201ENST00000363886 106 ntBASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 RNA5SP77-201ENST00000365394 120 ntBASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 RNA5SP198-201ENST00000410376 127 ntBASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 RNU2-18P-201ENST00000411224 162 ntBASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 CYCSP52-201ENST00000422857 310 ntBASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 OR4F13P-201ENST00000428478 931 ntBASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 Z68868.1-201ENST00000429048 544 ntBASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 MTATP6P30-201ENST00000443540 664 ntBASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 AL139156.3-201ENST00000454802 394 ntBASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 RPS27AP16-201ENST00000492222 470 ntBASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 IGHV7-34-1-201ENST00000519200 350 ntBASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 SMARCE1P3-201ENST00000553649 1231 ntBASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 AC244034.2-201ENST00000562504 509 ntBASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 AC012435.1-202ENST00000568772 240 ntBASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 RN7SL366P-201ENST00000577957 292 ntBASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 RNU6ATAC35P-201ENST00000609276 444 ntBASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 AL589743.7-201ENST00000612637 233 ntBASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 MIR6085-201ENST00000618314 110 ntBASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 CR381653.2-201ENST00000624041 768 ntBASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 LINC02495-203ENST00000636704 242 ntBASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 USP46-202ENST00000451218 4622 ntTSL 5 BASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 CASC19-228ENST00000641414 1684 ntBASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC7.66□□□□□ -1.18
NEDD1Q8NHV4 MROH3P-201ENST00000435735 2676 ntBASIC7.65□□□□□ -1.18
NEDD1Q8NHV4 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
NEDD1Q8NHV4 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
NEDD1Q8NHV4 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
NEDD1Q8NHV4 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
NEDD1Q8NHV4 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
NEDD1Q8NHV4 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
NEDD1Q8NHV4 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
NEDD1Q8NHV4 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
NEDD1Q8NHV4 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
NEDD1Q8NHV4 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
NEDD1Q8NHV4 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
NEDD1Q8NHV4 RNU1-46P-201ENST00000384425 164 ntBASIC7.65□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms