Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDKL3Q8IVW4 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CDKL3Q8IVW4 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.33□□□□□ -1.56
CDKL3Q8IVW4 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CDKL3Q8IVW4 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDKL3Q8IVW4 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDKL3Q8IVW4 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDKL3Q8IVW4 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDKL3Q8IVW4 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CDKL3Q8IVW4 AC073136.1-201ENST00000449426 2884 ntBASIC5.32□□□□□ -1.56
CDKL3Q8IVW4 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CDKL3Q8IVW4 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.32□□□□□ -1.56
CDKL3Q8IVW4 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDKL3Q8IVW4 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CDKL3Q8IVW4 AC092642.1-201ENST00000392417 425 ntBASIC5.32□□□□□ -1.56
CDKL3Q8IVW4 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDKL3Q8IVW4 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.32□□□□□ -1.56
CDKL3Q8IVW4 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.32□□□□□ -1.56
CDKL3Q8IVW4 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.32□□□□□ -1.56
CDKL3Q8IVW4 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.32□□□□□ -1.56
CDKL3Q8IVW4 AC093655.2-201ENST00000425735 631 ntBASIC5.32□□□□□ -1.56
CDKL3Q8IVW4 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.32□□□□□ -1.56
CDKL3Q8IVW4 Z92846.1-201ENST00000456203 268 ntBASIC5.32□□□□□ -1.56
CDKL3Q8IVW4 AC023141.9-201ENST00000458734 412 ntBASIC5.32□□□□□ -1.56
CDKL3Q8IVW4 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.32□□□□□ -1.56
CDKL3Q8IVW4 EIF3LP3-201ENST00000495197 822 ntBASIC5.32□□□□□ -1.56
CDKL3Q8IVW4 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.32□□□□□ -1.56
CDKL3Q8IVW4 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.32□□□□□ -1.56
CDKL3Q8IVW4 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.32□□□□□ -1.56
CDKL3Q8IVW4 GTF2F2P1-201ENST00000511083 675 ntBASIC5.32□□□□□ -1.56
CDKL3Q8IVW4 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.32□□□□□ -1.56
CDKL3Q8IVW4 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.32□□□□□ -1.56
CDKL3Q8IVW4 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CDKL3Q8IVW4 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.32□□□□□ -1.56
CDKL3Q8IVW4 AC069307.1-201ENST00000602820 447 ntBASIC5.32□□□□□ -1.56
CDKL3Q8IVW4 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.32□□□□□ -1.56
CDKL3Q8IVW4 AC073575.2-201ENST00000614212 627 ntBASIC5.32□□□□□ -1.56
CDKL3Q8IVW4 AC007204.2-201ENST00000615022 616 ntBASIC5.32□□□□□ -1.56
CDKL3Q8IVW4 AC108359.1-201ENST00000616451 1211 ntBASIC5.32□□□□□ -1.56
CDKL3Q8IVW4 AP000648.2-201ENST00000624182 404 ntBASIC5.32□□□□□ -1.56
CDKL3Q8IVW4 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
CDKL3Q8IVW4 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CDKL3Q8IVW4 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.32□□□□□ -1.56
CDKL3Q8IVW4 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CDKL3Q8IVW4 MAPK10-338ENST00000641647 3362 ntBASIC5.32□□□□□ -1.56
CDKL3Q8IVW4 SOCS5P3-201ENST00000425115 1576 ntBASIC5.32□□□□□ -1.56
CDKL3Q8IVW4 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDKL3Q8IVW4 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.32□□□□□ -1.56
CDKL3Q8IVW4 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDKL3Q8IVW4 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDKL3Q8IVW4 AC004817.4-201ENST00000602396 3625 ntBASIC5.31□□□□□ -1.56
CDKL3Q8IVW4 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CDKL3Q8IVW4 CASC19-221ENST00000641309 1382 ntBASIC5.31□□□□□ -1.56
CDKL3Q8IVW4 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDKL3Q8IVW4 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CDKL3Q8IVW4 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.31□□□□□ -1.56
CDKL3Q8IVW4 RN7SKP16-201ENST00000410180 299 ntBASIC5.31□□□□□ -1.56
CDKL3Q8IVW4 AC007738.1-201ENST00000413892 348 ntBASIC5.31□□□□□ -1.56
CDKL3Q8IVW4 AL513325.1-201ENST00000417716 1034 ntBASIC5.31□□□□□ -1.56
CDKL3Q8IVW4 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.31□□□□□ -1.56
CDKL3Q8IVW4 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.31□□□□□ -1.56
CDKL3Q8IVW4 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CDKL3Q8IVW4 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.31□□□□□ -1.56
CDKL3Q8IVW4 RPS26P41-201ENST00000450370 284 ntBASIC5.31□□□□□ -1.56
CDKL3Q8IVW4 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.31□□□□□ -1.56
CDKL3Q8IVW4 AC020779.1-201ENST00000478757 796 ntBASIC5.31□□□□□ -1.56
CDKL3Q8IVW4 RPL5P22-201ENST00000480199 884 ntBASIC5.31□□□□□ -1.56
CDKL3Q8IVW4 RPS4XP20-201ENST00000505751 772 ntBASIC5.31□□□□□ -1.56
CDKL3Q8IVW4 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.31□□□□□ -1.56
CDKL3Q8IVW4 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.31□□□□□ -1.56
CDKL3Q8IVW4 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.31□□□□□ -1.56
CDKL3Q8IVW4 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.31□□□□□ -1.56
CDKL3Q8IVW4 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDKL3Q8IVW4 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.31□□□□□ -1.56
CDKL3Q8IVW4 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.31□□□□□ -1.56
CDKL3Q8IVW4 SNORD95-201ENST00000579879 68 ntBASIC5.31□□□□□ -1.56
CDKL3Q8IVW4 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.31□□□□□ -1.56
CDKL3Q8IVW4 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.31□□□□□ -1.56
CDKL3Q8IVW4 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.31□□□□□ -1.56
CDKL3Q8IVW4 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.31□□□□□ -1.56
CDKL3Q8IVW4 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CDKL3Q8IVW4 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CDKL3Q8IVW4 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDKL3Q8IVW4 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.31□□□□□ -1.56
CDKL3Q8IVW4 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.31□□□□□ -1.56
CDKL3Q8IVW4 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CDKL3Q8IVW4 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.31□□□□□ -1.56
CDKL3Q8IVW4 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CDKL3Q8IVW4 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CDKL3Q8IVW4 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CDKL3Q8IVW4 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.31□□□□□ -1.56
CDKL3Q8IVW4 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CDKL3Q8IVW4 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms