Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC012254.4-201ENST00000588843 273 ntBASIC8.43□□□□□ -1.06
RC3H1Q5TC82 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC8.43□□□□□ -1.06
RC3H1Q5TC82 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC8.43□□□□□ -1.06
RC3H1Q5TC82 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC8.43□□□□□ -1.06
RC3H1Q5TC82 AL365204.3-201ENST00000612448 685 ntBASIC8.43□□□□□ -1.06
RC3H1Q5TC82 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC8.43□□□□□ -1.06
RC3H1Q5TC82 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC8.43□□□□□ -1.06
RC3H1Q5TC82 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
RC3H1Q5TC82 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC8.43□□□□□ -1.06
RC3H1Q5TC82 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC8.43□□□□□ -1.06
RC3H1Q5TC82 AL359715.4-201ENST00000606629 1436 ntBASIC8.43□□□□□ -1.06
RC3H1Q5TC82 UBE2V1-204ENST00000371677 2459 ntTSL 2 BASIC8.43□□□□□ -1.06
RC3H1Q5TC82 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC8.43□□□□□ -1.06
RC3H1Q5TC82 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
RC3H1Q5TC82 TTC39DP-201ENST00000416781 1688 ntBASIC8.43□□□□□ -1.06
RC3H1Q5TC82 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RC3H1Q5TC82 AL137918.1-201ENST00000624542 1922 ntBASIC8.42□□□□□ -1.06
RC3H1Q5TC82 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
RC3H1Q5TC82 AC137056.2-201ENST00000624055 1958 ntBASIC8.42□□□□□ -1.06
RC3H1Q5TC82 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
RC3H1Q5TC82 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
RC3H1Q5TC82 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
RC3H1Q5TC82 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC8.42□□□□□ -1.06
RC3H1Q5TC82 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
RC3H1Q5TC82 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC8.42□□□□□ -1.06
RC3H1Q5TC82 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC8.42□□□□□ -1.06
RC3H1Q5TC82 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
RC3H1Q5TC82 OR9G4-201ENST00000302957 984 ntBASIC8.42□□□□□ -1.06
RC3H1Q5TC82 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
RC3H1Q5TC82 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
RC3H1Q5TC82 OR1L1-202ENST00000373686 1083 ntBASIC8.42□□□□□ -1.06
RC3H1Q5TC82 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
RC3H1Q5TC82 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
RC3H1Q5TC82 HMGB1P10-201ENST00000395823 563 ntBASIC8.42□□□□□ -1.06
RC3H1Q5TC82 RN7SKP108-201ENST00000411367 328 ntBASIC8.42□□□□□ -1.06
RC3H1Q5TC82 OSTCP4-201ENST00000424397 449 ntBASIC8.42□□□□□ -1.06
RC3H1Q5TC82 ATP5F1P1-201ENST00000433775 569 ntBASIC8.42□□□□□ -1.06
RC3H1Q5TC82 USP9YP15-201ENST00000442391 422 ntBASIC8.42□□□□□ -1.06
RC3H1Q5TC82 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC8.42□□□□□ -1.06
RC3H1Q5TC82 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC8.42□□□□□ -1.06
RC3H1Q5TC82 AC010240.2-201ENST00000445363 1205 ntBASIC8.42□□□□□ -1.06
RC3H1Q5TC82 CEACAMP5-201ENST00000448037 961 ntBASIC8.42□□□□□ -1.06
RC3H1Q5TC82 AC072039.1-201ENST00000477611 581 ntBASIC8.42□□□□□ -1.06
RC3H1Q5TC82 RN7SL382P-201ENST00000482631 282 ntBASIC8.42□□□□□ -1.06
RC3H1Q5TC82 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
RC3H1Q5TC82 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC8.42□□□□□ -1.06
RC3H1Q5TC82 RPL19P11-201ENST00000495944 589 ntBASIC8.42□□□□□ -1.06
RC3H1Q5TC82 LSM3P4-201ENST00000502948 309 ntBASIC8.42□□□□□ -1.06
RC3H1Q5TC82 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC8.42□□□□□ -1.06
RC3H1Q5TC82 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC8.42□□□□□ -1.06
RC3H1Q5TC82 RNA5SP418-201ENST00000515951 117 ntBASIC8.42□□□□□ -1.06
RC3H1Q5TC82 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC8.42□□□□□ -1.06
RC3H1Q5TC82 TRIM77BP-201ENST00000524985 1119 ntBASIC8.42□□□□□ -1.06
RC3H1Q5TC82 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC8.42□□□□□ -1.06
RC3H1Q5TC82 AC106785.4-201ENST00000569492 412 ntBASIC8.42□□□□□ -1.06
RC3H1Q5TC82 MIR3614-201ENST00000581261 86 ntBASIC8.42□□□□□ -1.06
RC3H1Q5TC82 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC8.42□□□□□ -1.06
RC3H1Q5TC82 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC8.42□□□□□ -1.06
RC3H1Q5TC82 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC8.42□□□□□ -1.06
RC3H1Q5TC82 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC8.42□□□□□ -1.06
RC3H1Q5TC82 AC008121.3-201ENST00000618726 433 ntBASIC8.42□□□□□ -1.06
RC3H1Q5TC82 AC073569.3-201ENST00000619055 682 ntBASIC8.42□□□□□ -1.06
RC3H1Q5TC82 DRG1-207ENST00000629688 309 ntTSL 5 BASIC8.42□□□□□ -1.06
RC3H1Q5TC82 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
RC3H1Q5TC82 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC8.42□□□□□ -1.06
RC3H1Q5TC82 AC104837.1-201ENST00000444644 1587 ntBASIC8.42□□□□□ -1.06
RC3H1Q5TC82 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC8.42□□□□□ -1.06
RC3H1Q5TC82 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
RC3H1Q5TC82 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
RC3H1Q5TC82 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC8.42□□□□□ -1.06
RC3H1Q5TC82 ST7-203ENST00000393443 2360 ntTSL 2 BASIC8.42□□□□□ -1.06
RC3H1Q5TC82 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC8.42□□□□□ -1.06
RC3H1Q5TC82 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
RC3H1Q5TC82 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
RC3H1Q5TC82 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
RC3H1Q5TC82 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
RC3H1Q5TC82 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC8.41□□□□□ -1.06
RC3H1Q5TC82 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
RC3H1Q5TC82 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
RC3H1Q5TC82 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
RC3H1Q5TC82 PHF2P2-202ENST00000444553 2865 ntBASIC8.41□□□□□ -1.06
RC3H1Q5TC82 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC8.41□□□□□ -1.06
RC3H1Q5TC82 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC8.41□□□□□ -1.06
RC3H1Q5TC82 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RC3H1Q5TC82 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC8.41□□□□□ -1.06
RC3H1Q5TC82 MRRFP1-201ENST00000435941 1675 ntBASIC8.41□□□□□ -1.06
RC3H1Q5TC82 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
RC3H1Q5TC82 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC8.41□□□□□ -1.06
RC3H1Q5TC82 AC005539.1-201ENST00000443768 1479 ntBASIC8.41□□□□□ -1.06
RC3H1Q5TC82 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RC3H1Q5TC82 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
RC3H1Q5TC82 Y_RNA.160-201ENST00000363677 92 ntBASIC8.41□□□□□ -1.06
RC3H1Q5TC82 SMARCE1P6-201ENST00000398372 1216 ntBASIC8.41□□□□□ -1.06
RC3H1Q5TC82 RN7SKP206-201ENST00000410823 293 ntBASIC8.41□□□□□ -1.06
RC3H1Q5TC82 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC8.41□□□□□ -1.06
RC3H1Q5TC82 MTND1P28-201ENST00000435623 950 ntBASIC8.41□□□□□ -1.06
RC3H1Q5TC82 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC8.41□□□□□ -1.06
RC3H1Q5TC82 RBMY3AP-201ENST00000449381 1145 ntBASIC8.41□□□□□ -1.06
RC3H1Q5TC82 AC114786.4-201ENST00000508771 728 ntBASIC8.41□□□□□ -1.06
RC3H1Q5TC82 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC8.41□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms