Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC012400.1-201ENST00000518452 381 ntBASIC8.39□□□□□ -1.07
VARS2Q5ST30 IGHVII-51-2-201ENST00000519778 259 ntBASIC8.39□□□□□ -1.07
VARS2Q5ST30 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC8.39□□□□□ -1.07
VARS2Q5ST30 AC079313.2-202ENST00000552053 511 ntTSL 3 BASIC8.39□□□□□ -1.07
VARS2Q5ST30 IMMP1LP2-201ENST00000552954 492 ntBASIC8.39□□□□□ -1.07
VARS2Q5ST30 AC027796.5-201ENST00000573568 560 ntTSL 5 BASIC8.39□□□□□ -1.07
VARS2Q5ST30 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC8.39□□□□□ -1.07
VARS2Q5ST30 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
VARS2Q5ST30 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC8.39□□□□□ -1.07
VARS2Q5ST30 AC006557.5-201ENST00000603126 811 ntBASIC8.39□□□□□ -1.07
VARS2Q5ST30 FXYD6P1-201ENST00000604857 285 ntBASIC8.39□□□□□ -1.07
VARS2Q5ST30 AC087623.4-201ENST00000606593 695 ntBASIC8.39□□□□□ -1.07
VARS2Q5ST30 7SK.12-201ENST00000612820 244 ntBASIC8.39□□□□□ -1.07
VARS2Q5ST30 RMST_5.1-201ENST00000618704 126 ntBASIC8.39□□□□□ -1.07
VARS2Q5ST30 AC007546.1-201ENST00000619452 559 ntBASIC8.39□□□□□ -1.07
VARS2Q5ST30 AC012557.3-201ENST00000626439 255 ntBASIC8.39□□□□□ -1.07
VARS2Q5ST30 AC119674.1-212ENST00000641155 993 ntBASIC8.39□□□□□ -1.07
VARS2Q5ST30 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
VARS2Q5ST30 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
VARS2Q5ST30 IRAK4-214ENST00000613694 4280 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
VARS2Q5ST30 ZNF385D-201ENST00000281523 10699 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
VARS2Q5ST30 BRAFP1-201ENST00000445336 2703 ntBASIC8.39□□□□□ -1.07
VARS2Q5ST30 VN2R1P-201ENST00000449668 1743 ntBASIC8.39□□□□□ -1.07
VARS2Q5ST30 BEND2-202ENST00000380033 4611 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
VARS2Q5ST30 HCP5-201ENST00000414046 2658 ntTSL 4 BASIC8.39□□□□□ -1.07
VARS2Q5ST30 RECQL-203ENST00000421138 2572 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
VARS2Q5ST30 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC8.39□□□□□ -1.07
VARS2Q5ST30 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC8.39□□□□□ -1.07
VARS2Q5ST30 AOAH-208ENST00000612871 2336 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
VARS2Q5ST30 SMG7-202ENST00000367537 5970 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
VARS2Q5ST30 MAPK10-329ENST00000641555 2656 ntBASIC8.38□□□□□ -1.07
VARS2Q5ST30 RUNX1T1-203ENST00000396218 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC8.38□□□□□ -1.07
VARS2Q5ST30 MYB-235ENST00000533624 1818 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
VARS2Q5ST30 MYB-238ENST00000534044 1812 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
VARS2Q5ST30 PPIA-204ENST00000468812 2238 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
VARS2Q5ST30 GCNT2-216ENST00000495262 2214 ntAPPRIS ALT1 TSL 2 BASIC8.38□□□□□ -1.07
VARS2Q5ST30 B4GALNT2-202ENST00000393354 8657 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
VARS2Q5ST30 LAX1-203ENST00000442561 3023 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
VARS2Q5ST30 GMFB-209ENST00000616146 4125 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
VARS2Q5ST30 AURKA-203ENST00000371356 2112 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
VARS2Q5ST30 TANC1-201ENST00000263635 7470 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
VARS2Q5ST30 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC8.38□□□□□ -1.07
VARS2Q5ST30 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
VARS2Q5ST30 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC8.38□□□□□ -1.07
VARS2Q5ST30 OR2T6-201ENST00000355728 927 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
VARS2Q5ST30 Y_RNA.14-201ENST00000362415 103 ntBASIC8.38□□□□□ -1.07
VARS2Q5ST30 Y_RNA.255-201ENST00000364581 97 ntBASIC8.38□□□□□ -1.07
VARS2Q5ST30 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC8.38□□□□□ -1.07
VARS2Q5ST30 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC8.38□□□□□ -1.07
VARS2Q5ST30 MIR217-201ENST00000384817 110 ntBASIC8.38□□□□□ -1.07
VARS2Q5ST30 RPL23AP47-201ENST00000408017 460 ntBASIC8.38□□□□□ -1.07
VARS2Q5ST30 RNU4-26P-201ENST00000410270 107 ntBASIC8.38□□□□□ -1.07
VARS2Q5ST30 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC8.38□□□□□ -1.07
VARS2Q5ST30 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC8.38□□□□□ -1.07
VARS2Q5ST30 ATP5LP4-201ENST00000434169 307 ntBASIC8.38□□□□□ -1.07
VARS2Q5ST30 AL136454.1-201ENST00000443181 466 ntBASIC8.38□□□□□ -1.07
VARS2Q5ST30 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
VARS2Q5ST30 AL590490.1-201ENST00000455599 316 ntTSL 5 BASIC8.38□□□□□ -1.07
VARS2Q5ST30 RN7SL282P-201ENST00000479676 297 ntBASIC8.38□□□□□ -1.07
VARS2Q5ST30 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
VARS2Q5ST30 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
VARS2Q5ST30 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC8.38□□□□□ -1.07
VARS2Q5ST30 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC8.38□□□□□ -1.07
VARS2Q5ST30 POU5F1P7-201ENST00000508759 541 ntBASIC8.38□□□□□ -1.07
VARS2Q5ST30 AC026700.1-201ENST00000512074 544 ntBASIC8.38□□□□□ -1.07
VARS2Q5ST30 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
VARS2Q5ST30 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC8.38□□□□□ -1.07
VARS2Q5ST30 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC8.38□□□□□ -1.07
VARS2Q5ST30 AC103968.1-201ENST00000557841 573 ntBASIC8.38□□□□□ -1.07
VARS2Q5ST30 AC109460.4-201ENST00000561471 454 ntTSL 3 BASIC8.38□□□□□ -1.07
VARS2Q5ST30 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC8.38□□□□□ -1.07
VARS2Q5ST30 RPL27-205ENST00000589037 585 ntAPPRIS P1 TSL 3 BASIC8.38□□□□□ -1.07
VARS2Q5ST30 AC078899.3-201ENST00000599065 212 ntBASIC8.38□□□□□ -1.07
VARS2Q5ST30 BMS1P7-201ENST00000602440 1052 ntBASIC8.38□□□□□ -1.07
VARS2Q5ST30 AC140658.6-201ENST00000603958 201 ntBASIC8.38□□□□□ -1.07
VARS2Q5ST30 BNIP3P4-201ENST00000604946 565 ntBASIC8.38□□□□□ -1.07
VARS2Q5ST30 RN7SL715P-201ENST00000606972 286 ntBASIC8.38□□□□□ -1.07
VARS2Q5ST30 AC097468.3-201ENST00000607956 456 ntBASIC8.38□□□□□ -1.07
VARS2Q5ST30 MIR6883-201ENST00000614952 78 ntBASIC8.38□□□□□ -1.07
VARS2Q5ST30 AC016582.3-206ENST00000636547 207 ntBASIC8.38□□□□□ -1.07
VARS2Q5ST30 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
VARS2Q5ST30 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
VARS2Q5ST30 CD46-209ENST00000367047 3089 ntTSL 5 BASIC8.38□□□□□ -1.07
VARS2Q5ST30 AC005592.1-201ENST00000566527 1640 ntBASIC8.38□□□□□ -1.07
VARS2Q5ST30 AC233263.6-201ENST00000631132 1963 ntBASIC8.38□□□□□ -1.07
VARS2Q5ST30 POGZ-205ENST00000409503 4813 ntAPPRIS ALT1 TSL 2 BASIC8.38□□□□□ -1.07
VARS2Q5ST30 USP48-203ENST00000374732 3037 ntTSL 2 BASIC8.38□□□□□ -1.07
VARS2Q5ST30 OSBPL6-202ENST00000315022 2999 ntTSL 2 BASIC8.38□□□□□ -1.07
VARS2Q5ST30 CDK19-201ENST00000323817 6067 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
VARS2Q5ST30 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
VARS2Q5ST30 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
VARS2Q5ST30 MSN-201ENST00000360270 3944 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
VARS2Q5ST30 CCDC149-204ENST00000504487 3869 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
VARS2Q5ST30 MTERF4-222ENST00000614476 4524 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
VARS2Q5ST30 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
VARS2Q5ST30 LINC01692-201ENST00000441009 2719 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
VARS2Q5ST30 NAA40-202ENST00000377793 3664 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
VARS2Q5ST30 LINC01105-204ENST00000444416 2695 ntTSL 2 BASIC8.37□□□□□ -1.07
VARS2Q5ST30 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC8.37□□□□□ -1.07
VARS2Q5ST30 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms