Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 EIF4A2P5-201ENST00000529914 499 ntBASIC4.67□□□□□ -1.66
CCDC58Q4VC31 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC58Q4VC31 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.67□□□□□ -1.66
CCDC58Q4VC31 AC011840.5-201ENST00000582125 771 ntBASIC4.67□□□□□ -1.66
CCDC58Q4VC31 AC011626.1-201ENST00000604710 562 ntBASIC4.67□□□□□ -1.66
CCDC58Q4VC31 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC58Q4VC31 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC58Q4VC31 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC58Q4VC31 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC58Q4VC31 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
CCDC58Q4VC31 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC58Q4VC31 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC58Q4VC31 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC58Q4VC31 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
CCDC58Q4VC31 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
CCDC58Q4VC31 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC58Q4VC31 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC58Q4VC31 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC58Q4VC31 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
CCDC58Q4VC31 RNA5SP394-201ENST00000364216 119 ntBASIC4.66□□□□□ -1.66
CCDC58Q4VC31 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CCDC58Q4VC31 HMGB1P20-201ENST00000402555 677 ntBASIC4.66□□□□□ -1.66
CCDC58Q4VC31 AC245060.4-201ENST00000413293 1121 ntBASIC4.66□□□□□ -1.66
CCDC58Q4VC31 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC58Q4VC31 GTF2IP2-201ENST00000424290 697 ntBASIC4.66□□□□□ -1.66
CCDC58Q4VC31 NAP1L4P2-201ENST00000425958 899 ntBASIC4.66□□□□□ -1.66
CCDC58Q4VC31 AC009238.2-201ENST00000431026 355 ntBASIC4.66□□□□□ -1.66
CCDC58Q4VC31 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC58Q4VC31 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC58Q4VC31 GAPDHP25-201ENST00000447061 1001 ntBASIC4.66□□□□□ -1.66
CCDC58Q4VC31 RN7SL423P-201ENST00000486202 304 ntBASIC4.66□□□□□ -1.66
CCDC58Q4VC31 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.66□□□□□ -1.66
CCDC58Q4VC31 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC58Q4VC31 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC58Q4VC31 HMGB3P13-201ENST00000511263 607 ntBASIC4.66□□□□□ -1.66
CCDC58Q4VC31 AC105031.1-201ENST00000518550 476 ntBASIC4.66□□□□□ -1.66
CCDC58Q4VC31 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC58Q4VC31 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.66□□□□□ -1.66
CCDC58Q4VC31 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC58Q4VC31 RBM22P12-201ENST00000567098 1255 ntBASIC4.66□□□□□ -1.66
CCDC58Q4VC31 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC58Q4VC31 RN7SL708P-201ENST00000580952 299 ntBASIC4.66□□□□□ -1.66
CCDC58Q4VC31 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CCDC58Q4VC31 AC060766.1-201ENST00000590824 627 ntBASIC4.66□□□□□ -1.66
CCDC58Q4VC31 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC58Q4VC31 AC005479.3-201ENST00000602790 431 ntBASIC4.66□□□□□ -1.66
CCDC58Q4VC31 AC005252.1-201ENST00000604518 1063 ntBASIC4.66□□□□□ -1.66
CCDC58Q4VC31 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC58Q4VC31 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CCDC58Q4VC31 AL118522.2-201ENST00000616045 615 ntBASIC4.66□□□□□ -1.66
CCDC58Q4VC31 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC58Q4VC31 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
CCDC58Q4VC31 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC58Q4VC31 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC58Q4VC31 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC58Q4VC31 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC58Q4VC31 AC018529.3-201ENST00000624212 2254 ntBASIC4.66□□□□□ -1.66
CCDC58Q4VC31 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CCDC58Q4VC31 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC58Q4VC31 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC58Q4VC31 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC58Q4VC31 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CCDC58Q4VC31 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.65□□□□□ -1.66
CCDC58Q4VC31 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC58Q4VC31 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.65□□□□□ -1.66
CCDC58Q4VC31 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC58Q4VC31 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.65□□□□□ -1.66
CCDC58Q4VC31 YES1P1-201ENST00000418510 1628 ntBASIC4.65□□□□□ -1.66
CCDC58Q4VC31 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC58Q4VC31 AC114786.1-201ENST00000512892 1415 ntBASIC4.65□□□□□ -1.66
CCDC58Q4VC31 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC58Q4VC31 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC58Q4VC31 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.65□□□□□ -1.66
CCDC58Q4VC31 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC58Q4VC31 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC58Q4VC31 ODF3-202ENST00000342593 386 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC58Q4VC31 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.65□□□□□ -1.67
CCDC58Q4VC31 RNA5SP232-201ENST00000364144 119 ntBASIC4.65□□□□□ -1.67
CCDC58Q4VC31 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC58Q4VC31 HSPA8P15-201ENST00000401676 786 ntBASIC4.65□□□□□ -1.67
CCDC58Q4VC31 AL121834.1-202ENST00000404494 277 ntBASIC4.65□□□□□ -1.67
CCDC58Q4VC31 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC58Q4VC31 AL354893.1-201ENST00000433735 348 ntBASIC4.65□□□□□ -1.67
CCDC58Q4VC31 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC58Q4VC31 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC58Q4VC31 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CCDC58Q4VC31 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC58Q4VC31 AP006222.1-205ENST00000450734 457 ntBASIC4.65□□□□□ -1.67
CCDC58Q4VC31 AC112206.1-201ENST00000468416 477 ntBASIC4.65□□□□□ -1.67
CCDC58Q4VC31 RN7SL189P-201ENST00000468631 289 ntBASIC4.65□□□□□ -1.67
CCDC58Q4VC31 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
CCDC58Q4VC31 RPL23AP37-201ENST00000479658 549 ntBASIC4.65□□□□□ -1.67
CCDC58Q4VC31 AC044810.1-201ENST00000480271 711 ntBASIC4.65□□□□□ -1.67
CCDC58Q4VC31 RN7SL447P-201ENST00000494711 245 ntBASIC4.65□□□□□ -1.67
CCDC58Q4VC31 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC58Q4VC31 AK6-204ENST00000512561 587 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC58Q4VC31 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC58Q4VC31 AC092121.1-201ENST00000569452 202 ntBASIC4.65□□□□□ -1.67
CCDC58Q4VC31 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC58Q4VC31 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms