Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
AP3S2P59780 RN7SL763P-201ENST00000620922 284 ntBASIC4.45□□□□□ -1.7
AP3S2P59780 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.45□□□□□ -1.7
AP3S2P59780 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
AP3S2P59780 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.45□□□□□ -1.7
AP3S2P59780 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
AP3S2P59780 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
AP3S2P59780 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
AP3S2P59780 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
AP3S2P59780 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
AP3S2P59780 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.45□□□□□ -1.7
AP3S2P59780 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
AP3S2P59780 OR14L1P-202ENST00000641545 3009 ntBASIC4.45□□□□□ -1.7
AP3S2P59780 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
AP3S2P59780 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
AP3S2P59780 AC091046.3-201ENST00000631455 1574 ntBASIC4.44□□□□□ -1.7
AP3S2P59780 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.44□□□□□ -1.7
AP3S2P59780 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.44□□□□□ -1.7
AP3S2P59780 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
AP3S2P59780 RNFT1P3-201ENST00000340898 1052 ntBASIC4.44□□□□□ -1.7
AP3S2P59780 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
AP3S2P59780 SNORA51.9-201ENST00000384295 124 ntBASIC4.44□□□□□ -1.7
AP3S2P59780 AC104297.1-201ENST00000393779 870 ntBASIC4.44□□□□□ -1.7
AP3S2P59780 ARSFP1-201ENST00000398758 477 ntBASIC4.44□□□□□ -1.7
AP3S2P59780 AL133260.1-201ENST00000405720 405 ntBASIC4.44□□□□□ -1.7
AP3S2P59780 NCSTNP1-201ENST00000406229 144 ntBASIC4.44□□□□□ -1.7
AP3S2P59780 GAPDHP42-201ENST00000406848 981 ntBASIC4.44□□□□□ -1.7
AP3S2P59780 AL354890.1-201ENST00000413730 346 ntBASIC4.44□□□□□ -1.7
AP3S2P59780 AL139148.1-201ENST00000427122 680 ntBASIC4.44□□□□□ -1.7
AP3S2P59780 SLC25A24P1-202ENST00000434803 1220 ntBASIC4.44□□□□□ -1.7
AP3S2P59780 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
AP3S2P59780 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC4.44□□□□□ -1.7
AP3S2P59780 UBQLN1P1-207ENST00000441056 1169 ntBASIC4.44□□□□□ -1.7
AP3S2P59780 AC092601.1-201ENST00000444526 383 ntBASIC4.44□□□□□ -1.7
AP3S2P59780 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
AP3S2P59780 GAS5-218ENST00000448718 565 ntTSL 2 BASIC4.44□□□□□ -1.7
AP3S2P59780 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.44□□□□□ -1.7
AP3S2P59780 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.44□□□□□ -1.7
AP3S2P59780 AL133244.1-201ENST00000456007 258 ntBASIC4.44□□□□□ -1.7
AP3S2P59780 AP002884.1-201ENST00000479691 655 ntBASIC4.44□□□□□ -1.7
AP3S2P59780 RN7SL423P-201ENST00000486202 304 ntBASIC4.44□□□□□ -1.7
AP3S2P59780 RPL9P15-201ENST00000491096 532 ntBASIC4.44□□□□□ -1.7
AP3S2P59780 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.44□□□□□ -1.7
AP3S2P59780 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
AP3S2P59780 AC113430.1-201ENST00000506872 718 ntBASIC4.44□□□□□ -1.7
AP3S2P59780 HMGB1P44-201ENST00000508597 572 ntBASIC4.44□□□□□ -1.7
AP3S2P59780 RNA5SP464-201ENST00000516251 108 ntBASIC4.44□□□□□ -1.7
AP3S2P59780 RN7SKP238-201ENST00000516483 249 ntBASIC4.44□□□□□ -1.7
AP3S2P59780 RNA5SP75-201ENST00000516841 111 ntBASIC4.44□□□□□ -1.7
AP3S2P59780 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
AP3S2P59780 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.44□□□□□ -1.7
AP3S2P59780 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC4.44□□□□□ -1.7
AP3S2P59780 HNRNPRP2-201ENST00000528421 743 ntBASIC4.44□□□□□ -1.7
AP3S2P59780 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.44□□□□□ -1.7
AP3S2P59780 HMGB1P42-201ENST00000532126 553 ntBASIC4.44□□□□□ -1.7
AP3S2P59780 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC4.44□□□□□ -1.7
AP3S2P59780 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.44□□□□□ -1.7
AP3S2P59780 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC4.44□□□□□ -1.7
AP3S2P59780 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.44□□□□□ -1.7
AP3S2P59780 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
AP3S2P59780 AC004232.2-201ENST00000574245 821 ntBASIC4.44□□□□□ -1.7
AP3S2P59780 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC4.44□□□□□ -1.7
AP3S2P59780 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC4.44□□□□□ -1.7
AP3S2P59780 TEX41-218ENST00000596540 882 ntTSL 5 BASIC4.44□□□□□ -1.7
AP3S2P59780 AL078624.2-201ENST00000605063 554 ntBASIC4.44□□□□□ -1.7
AP3S2P59780 AC092266.1-201ENST00000610958 165 ntBASIC4.44□□□□□ -1.7
AP3S2P59780 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC4.44□□□□□ -1.7
AP3S2P59780 CASC19-222ENST00000641321 1173 ntBASIC4.44□□□□□ -1.7
AP3S2P59780 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
AP3S2P59780 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
AP3S2P59780 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
AP3S2P59780 AL133268.1-201ENST00000405676 1401 ntBASIC4.44□□□□□ -1.7
AP3S2P59780 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
AP3S2P59780 AC027279.1-201ENST00000568885 4284 ntBASIC4.44□□□□□ -1.7
AP3S2P59780 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
AP3S2P59780 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
AP3S2P59780 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
AP3S2P59780 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
AP3S2P59780 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
AP3S2P59780 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.44□□□□□ -1.7
AP3S2P59780 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
AP3S2P59780 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
AP3S2P59780 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
AP3S2P59780 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
AP3S2P59780 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.43□□□□□ -1.7
AP3S2P59780 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.43□□□□□ -1.7
AP3S2P59780 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
AP3S2P59780 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
AP3S2P59780 AL359922.3-201ENST00000624779 1670 ntBASIC4.43□□□□□ -1.7
AP3S2P59780 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
AP3S2P59780 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
AP3S2P59780 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
AP3S2P59780 MIR130B-202ENST00000385018 82 ntBASIC4.43□□□□□ -1.7
AP3S2P59780 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
AP3S2P59780 U3.32-201ENST00000408116 212 ntBASIC4.43□□□□□ -1.7
AP3S2P59780 AL358176.3-201ENST00000420757 454 ntBASIC4.43□□□□□ -1.7
AP3S2P59780 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.43□□□□□ -1.7
AP3S2P59780 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC4.43□□□□□ -1.7
AP3S2P59780 ATP6V1E1P1-201ENST00000439215 681 ntBASIC4.43□□□□□ -1.7
AP3S2P59780 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms