Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 EPHA1-AS1-202ENST00000429289 5018 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HTTP42858 CECR2-206ENST00000612582 9645 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
HTTP42858 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HTTP42858 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.37□□□□□ -1.55
HTTP42858 AL139095.3-201ENST00000419672 1203 ntBASIC5.37□□□□□ -1.55
HTTP42858 AL132765.1-201ENST00000434165 553 ntBASIC5.37□□□□□ -1.55
HTTP42858 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.37□□□□□ -1.55
HTTP42858 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.37□□□□□ -1.55
HTTP42858 AC091959.2-201ENST00000477363 321 ntBASIC5.37□□□□□ -1.55
HTTP42858 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HTTP42858 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.37□□□□□ -1.55
HTTP42858 AC010632.3-201ENST00000611377 369 ntBASIC5.37□□□□□ -1.55
HTTP42858 AC090506.2-201ENST00000624521 419 ntBASIC5.37□□□□□ -1.55
HTTP42858 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HTTP42858 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.37□□□□□ -1.55
HTTP42858 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5.37□□□□□ -1.55
HTTP42858 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HTTP42858 BAZ2A-214ENST00000551812 8600 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
HTTP42858 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.37□□□□□ -1.55
HTTP42858 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
HTTP42858 CD34-201ENST00000310833 8246 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
HTTP42858 RPS26P8-201ENST00000393490 348 ntBASIC5.37□□□□□ -1.55
HTTP42858 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.37□□□□□ -1.55
HTTP42858 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.37□□□□□ -1.55
HTTP42858 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
HTTP42858 AC010547.7-201ENST00000570323 333 ntBASIC5.37□□□□□ -1.55
HTTP42858 MIR5699-201ENST00000578903 90 ntBASIC5.37□□□□□ -1.55
HTTP42858 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.37□□□□□ -1.55
HTTP42858 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.36□□□□□ -1.55
HTTP42858 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HTTP42858 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HTTP42858 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HTTP42858 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.36□□□□□ -1.55
HTTP42858 NHSL2-207ENST00000633930 13660 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
HTTP42858 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HTTP42858 U3.32-201ENST00000408116 212 ntBASIC5.36□□□□□ -1.55
HTTP42858 AL356387.2-201ENST00000422272 243 ntBASIC5.36□□□□□ -1.55
HTTP42858 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HTTP42858 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.36□□□□□ -1.55
HTTP42858 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.36□□□□□ -1.55
HTTP42858 AC116562.1-201ENST00000485355 781 ntBASIC5.36□□□□□ -1.55
HTTP42858 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.36□□□□□ -1.55
HTTP42858 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.36□□□□□ -1.55
HTTP42858 RN7SL339P-201ENST00000580597 296 ntBASIC5.36□□□□□ -1.55
HTTP42858 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.36□□□□□ -1.55
HTTP42858 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HTTP42858 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.36□□□□□ -1.55
HTTP42858 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HTTP42858 MAK-202ENST00000354489 3941 ntTSL 5 BASIC5.36□□□□□ -1.55
HTTP42858 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
HTTP42858 MYO15A-201ENST00000205890 11863 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
HTTP42858 MIR372-201ENST00000362225 67 ntBASIC5.36□□□□□ -1.55
HTTP42858 RNU1-59P-201ENST00000364829 162 ntBASIC5.36□□□□□ -1.55
HTTP42858 RNU1-82P-201ENST00000390851 165 ntBASIC5.36□□□□□ -1.55
HTTP42858 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.36□□□□□ -1.55
HTTP42858 RRM2P4-201ENST00000441721 562 ntBASIC5.36□□□□□ -1.55
HTTP42858 TPT1P3-201ENST00000492841 512 ntBASIC5.36□□□□□ -1.55
HTTP42858 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.36□□□□□ -1.55
HTTP42858 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HTTP42858 TRAV8-5-201ENST00000537369 341 ntBASIC5.36□□□□□ -1.55
HTTP42858 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.36□□□□□ -1.55
HTTP42858 AC008739.3-201ENST00000603262 127 ntBASIC5.36□□□□□ -1.55
HTTP42858 U1.25-201ENST00000614085 162 ntBASIC5.36□□□□□ -1.55
HTTP42858 AC015712.7-201ENST00000615211 635 ntBASIC5.36□□□□□ -1.55
HTTP42858 U1.34-201ENST00000618578 162 ntBASIC5.36□□□□□ -1.55
HTTP42858 U1.31-201ENST00000620022 160 ntBASIC5.36□□□□□ -1.55
HTTP42858 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.36□□□□□ -1.55
HTTP42858 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.36□□□□□ -1.55
HTTP42858 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
HTTP42858 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HTTP42858 CAST-222ENST00000508579 1758 ntTSL 2 BASIC5.35□□□□□ -1.55
HTTP42858 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HTTP42858 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
HTTP42858 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HTTP42858 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.35□□□□□ -1.55
HTTP42858 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HTTP42858 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.35□□□□□ -1.55
HTTP42858 RN7SKP16-201ENST00000410180 299 ntBASIC5.35□□□□□ -1.55
HTTP42858 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.35□□□□□ -1.55
HTTP42858 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
HTTP42858 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.35□□□□□ -1.55
HTTP42858 IMPA1P1-201ENST00000510718 842 ntBASIC5.35□□□□□ -1.55
HTTP42858 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.35□□□□□ -1.55
HTTP42858 AL049794.2-201ENST00000616301 365 ntBASIC5.35□□□□□ -1.55
HTTP42858 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.35□□□□□ -1.55
HTTP42858 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HTTP42858 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HTTP42858 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
HTTP42858 PCDH15-224ENST00000612394 5765 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
HTTP42858 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HTTP42858 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HTTP42858 AC004076.2-201ENST00000620532 3323 ntBASIC5.35□□□□□ -1.55
HTTP42858 MKI67-202ENST00000368654 12678 ntAPPRIS P3 TSL 2 BASIC5.35□□□□□ -1.55
HTTP42858 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HTTP42858 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HTTP42858 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.35□□□□□ -1.55
HTTP42858 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HTTP42858 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HTTP42858 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.35□□□□□ -1.55
HTTP42858 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms