Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 AC125336.1-201ENST00000508893 2827 ntBASIC5.56□□□□□ -1.52
CTPS1P17812 RN7SKP6-201ENST00000364795 319 ntBASIC5.56□□□□□ -1.52
CTPS1P17812 RNU4-2-201ENST00000365668 141 ntBASIC5.56□□□□□ -1.52
CTPS1P17812 SNORA16A-201ENST00000384342 137 ntBASIC5.56□□□□□ -1.52
CTPS1P17812 RN7SKP206-201ENST00000410823 293 ntBASIC5.56□□□□□ -1.52
CTPS1P17812 RN7SKP293-201ENST00000411389 296 ntBASIC5.56□□□□□ -1.52
CTPS1P17812 DPPA2P2-201ENST00000418220 897 ntBASIC5.56□□□□□ -1.52
CTPS1P17812 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.56□□□□□ -1.52
CTPS1P17812 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CTPS1P17812 RPS26P4-201ENST00000431743 355 ntBASIC5.56□□□□□ -1.52
CTPS1P17812 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC5.56□□□□□ -1.52
CTPS1P17812 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.56□□□□□ -1.52
CTPS1P17812 AC092106.1-201ENST00000444291 373 ntBASIC5.56□□□□□ -1.52
CTPS1P17812 RPS23P9-201ENST00000448848 438 ntBASIC5.56□□□□□ -1.52
CTPS1P17812 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.56□□□□□ -1.52
CTPS1P17812 ATP5LP5-201ENST00000483050 299 ntBASIC5.56□□□□□ -1.52
CTPS1P17812 RPS17P5-201ENST00000498293 408 ntBASIC5.56□□□□□ -1.52
CTPS1P17812 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.56□□□□□ -1.52
CTPS1P17812 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CTPS1P17812 AC119751.4-201ENST00000507498 357 ntBASIC5.56□□□□□ -1.52
CTPS1P17812 GLUD1P3-202ENST00000508551 200 ntBASIC5.56□□□□□ -1.52
CTPS1P17812 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC5.56□□□□□ -1.52
CTPS1P17812 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.56□□□□□ -1.52
CTPS1P17812 AC104072.1-201ENST00000568817 668 ntBASIC5.56□□□□□ -1.52
CTPS1P17812 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.56□□□□□ -1.52
CTPS1P17812 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.56□□□□□ -1.52
CTPS1P17812 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.56□□□□□ -1.52
CTPS1P17812 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.56□□□□□ -1.52
CTPS1P17812 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.56□□□□□ -1.52
CTPS1P17812 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CTPS1P17812 AL049777.1-201ENST00000622740 518 ntBASIC5.56□□□□□ -1.52
CTPS1P17812 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.56□□□□□ -1.52
CTPS1P17812 MIR4302-201ENST00000638058 60 ntBASIC5.56□□□□□ -1.52
CTPS1P17812 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.56□□□□□ -1.52
CTPS1P17812 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CTPS1P17812 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
CTPS1P17812 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CTPS1P17812 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.56□□□□□ -1.52
CTPS1P17812 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CTPS1P17812 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CTPS1P17812 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CTPS1P17812 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
CTPS1P17812 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.55□□□□□ -1.52
CTPS1P17812 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CTPS1P17812 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.55□□□□□ -1.52
CTPS1P17812 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
CTPS1P17812 AL121839.2-201ENST00000565058 6943 ntBASIC5.55□□□□□ -1.52
CTPS1P17812 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
CTPS1P17812 AC114774.1-201ENST00000507410 1770 ntBASIC5.55□□□□□ -1.52
CTPS1P17812 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
CTPS1P17812 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CTPS1P17812 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CTPS1P17812 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CTPS1P17812 RNA5SP453-201ENST00000362503 119 ntBASIC5.55□□□□□ -1.52
CTPS1P17812 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CTPS1P17812 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.55□□□□□ -1.52
CTPS1P17812 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CTPS1P17812 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC5.55□□□□□ -1.52
CTPS1P17812 AC007161.1-204ENST00000423039 460 ntBASIC5.55□□□□□ -1.52
CTPS1P17812 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.55□□□□□ -1.52
CTPS1P17812 AC091544.1-201ENST00000484702 348 ntBASIC5.55□□□□□ -1.52
CTPS1P17812 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.55□□□□□ -1.52
CTPS1P17812 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.55□□□□□ -1.52
CTPS1P17812 AL136038.1-201ENST00000497246 351 ntBASIC5.55□□□□□ -1.52
CTPS1P17812 MTCO2P9-201ENST00000503214 694 ntBASIC5.55□□□□□ -1.52
CTPS1P17812 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.55□□□□□ -1.52
CTPS1P17812 C1GALT1P2-201ENST00000510813 1104 ntBASIC5.55□□□□□ -1.52
CTPS1P17812 AC010374.2-201ENST00000512933 535 ntBASIC5.55□□□□□ -1.52
CTPS1P17812 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.55□□□□□ -1.52
CTPS1P17812 MTATP6P9-201ENST00000515039 680 ntBASIC5.55□□□□□ -1.52
CTPS1P17812 AC097486.1-201ENST00000515331 210 ntBASIC5.55□□□□□ -1.52
CTPS1P17812 AC016550.3-201ENST00000515706 767 ntBASIC5.55□□□□□ -1.52
CTPS1P17812 HMGB1P46-201ENST00000520062 610 ntBASIC5.55□□□□□ -1.52
CTPS1P17812 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.55□□□□□ -1.52
CTPS1P17812 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC5.55□□□□□ -1.52
CTPS1P17812 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.55□□□□□ -1.52
CTPS1P17812 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.55□□□□□ -1.52
CTPS1P17812 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.55□□□□□ -1.52
CTPS1P17812 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.55□□□□□ -1.52
CTPS1P17812 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.55□□□□□ -1.52
CTPS1P17812 AC027216.1-201ENST00000577726 685 ntBASIC5.55□□□□□ -1.52
CTPS1P17812 H3F3BP2-201ENST00000583907 357 ntBASIC5.55□□□□□ -1.52
CTPS1P17812 AC090330.1-201ENST00000588646 764 ntBASIC5.55□□□□□ -1.52
CTPS1P17812 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.55□□□□□ -1.52
CTPS1P17812 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
CTPS1P17812 AP002884.5-201ENST00000595053 1132 ntBASIC5.55□□□□□ -1.52
CTPS1P17812 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.55□□□□□ -1.52
CTPS1P17812 AL391834.2-201ENST00000609982 546 ntBASIC5.55□□□□□ -1.52
CTPS1P17812 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.55□□□□□ -1.52
CTPS1P17812 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.55□□□□□ -1.52
CTPS1P17812 AC097460.3-201ENST00000623099 442 ntBASIC5.55□□□□□ -1.52
CTPS1P17812 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.55□□□□□ -1.52
CTPS1P17812 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CTPS1P17812 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.55□□□□□ -1.52
CTPS1P17812 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.55□□□□□ -1.52
CTPS1P17812 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
CTPS1P17812 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CTPS1P17812 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CTPS1P17812 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CTPS1P17812 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms