Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 AC024940.3-201ENST00000538551 316 ntBASIC4.53□□□□□ -1.68
CTLA4P16410 AL049779.2-201ENST00000553847 315 ntBASIC4.53□□□□□ -1.68
CTLA4P16410 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.53□□□□□ -1.68
CTLA4P16410 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.53□□□□□ -1.68
CTLA4P16410 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.53□□□□□ -1.68
CTLA4P16410 SAMMSON-227ENST00000642114 1199 ntBASIC4.53□□□□□ -1.68
CTLA4P16410 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.53□□□□□ -1.68
CTLA4P16410 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CTLA4P16410 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CTLA4P16410 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CTLA4P16410 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.53□□□□□ -1.68
CTLA4P16410 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CTLA4P16410 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.53□□□□□ -1.68
CTLA4P16410 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.53□□□□□ -1.68
CTLA4P16410 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
CTLA4P16410 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC4.52□□□□□ -1.69
CTLA4P16410 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.52□□□□□ -1.69
CTLA4P16410 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CTLA4P16410 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.52□□□□□ -1.69
CTLA4P16410 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CTLA4P16410 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.52□□□□□ -1.69
CTLA4P16410 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CTLA4P16410 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CTLA4P16410 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.52□□□□□ -1.69
CTLA4P16410 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
CTLA4P16410 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CTLA4P16410 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CTLA4P16410 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CTLA4P16410 AL512422.1-201ENST00000407033 553 ntBASIC4.52□□□□□ -1.69
CTLA4P16410 AC211486.3-201ENST00000412694 621 ntBASIC4.52□□□□□ -1.69
CTLA4P16410 NPM1P4-201ENST00000414095 812 ntBASIC4.52□□□□□ -1.69
CTLA4P16410 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.52□□□□□ -1.69
CTLA4P16410 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.52□□□□□ -1.69
CTLA4P16410 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.52□□□□□ -1.69
CTLA4P16410 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC4.52□□□□□ -1.69
CTLA4P16410 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.52□□□□□ -1.69
CTLA4P16410 RN7SL443P-201ENST00000464331 290 ntBASIC4.52□□□□□ -1.69
CTLA4P16410 AC009127.1-201ENST00000467090 155 ntBASIC4.52□□□□□ -1.69
CTLA4P16410 UBA52P7-201ENST00000486088 380 ntBASIC4.52□□□□□ -1.69
CTLA4P16410 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.52□□□□□ -1.69
CTLA4P16410 RN7SL101P-201ENST00000496350 279 ntBASIC4.52□□□□□ -1.69
CTLA4P16410 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.52□□□□□ -1.69
CTLA4P16410 AC105031.1-201ENST00000518550 476 ntBASIC4.52□□□□□ -1.69
CTLA4P16410 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.52□□□□□ -1.69
CTLA4P16410 OR4A46P-201ENST00000527255 933 ntBASIC4.52□□□□□ -1.69
CTLA4P16410 AC012146.2-201ENST00000576545 416 ntBASIC4.52□□□□□ -1.69
CTLA4P16410 AC011840.5-201ENST00000582125 771 ntBASIC4.52□□□□□ -1.69
CTLA4P16410 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.52□□□□□ -1.69
CTLA4P16410 RNU6-84P-201ENST00000607737 102 ntBASIC4.52□□□□□ -1.69
CTLA4P16410 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CTLA4P16410 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CTLA4P16410 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CTLA4P16410 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.52□□□□□ -1.69
CTLA4P16410 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CTLA4P16410 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CTLA4P16410 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CTLA4P16410 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.51□□□□□ -1.69
CTLA4P16410 PANDAR-201ENST00000629595 1506 ntBASIC4.51□□□□□ -1.69
CTLA4P16410 AC068870.3-201ENST00000625077 2536 ntBASIC4.51□□□□□ -1.69
CTLA4P16410 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.51□□□□□ -1.69
CTLA4P16410 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CTLA4P16410 SCARNA15-201ENST00000607520 4325 ntBASIC4.51□□□□□ -1.69
CTLA4P16410 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
CTLA4P16410 AC017079.1-201ENST00000333650 415 ntBASIC4.51□□□□□ -1.69
CTLA4P16410 RN7SKP113-201ENST00000363891 295 ntBASIC4.51□□□□□ -1.69
CTLA4P16410 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.51□□□□□ -1.69
CTLA4P16410 AC013429.2-201ENST00000418798 781 ntBASIC4.51□□□□□ -1.69
CTLA4P16410 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CTLA4P16410 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.51□□□□□ -1.69
CTLA4P16410 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.51□□□□□ -1.69
CTLA4P16410 BX323845.1-201ENST00000432417 179 ntBASIC4.51□□□□□ -1.69
CTLA4P16410 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.51□□□□□ -1.69
CTLA4P16410 RPL35AP21-201ENST00000437667 333 ntBASIC4.51□□□□□ -1.69
CTLA4P16410 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.51□□□□□ -1.69
CTLA4P16410 MRPL35P2-201ENST00000448009 511 ntBASIC4.51□□□□□ -1.69
CTLA4P16410 RPL7P39-201ENST00000481157 744 ntBASIC4.51□□□□□ -1.69
CTLA4P16410 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.51□□□□□ -1.69
CTLA4P16410 AC024558.1-201ENST00000505008 528 ntBASIC4.51□□□□□ -1.69
CTLA4P16410 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.51□□□□□ -1.69
CTLA4P16410 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
CTLA4P16410 IGKV2-18-201ENST00000522607 343 ntBASIC4.51□□□□□ -1.69
CTLA4P16410 AC027026.1-201ENST00000532323 742 ntBASIC4.51□□□□□ -1.69
CTLA4P16410 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.51□□□□□ -1.69
CTLA4P16410 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CTLA4P16410 NDUFB4P11-201ENST00000560510 395 ntBASIC4.51□□□□□ -1.69
CTLA4P16410 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.51□□□□□ -1.69
CTLA4P16410 AC011445.2-201ENST00000599274 173 ntBASIC4.51□□□□□ -1.69
CTLA4P16410 IMMP1LP3-201ENST00000604197 224 ntBASIC4.51□□□□□ -1.69
CTLA4P16410 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.51□□□□□ -1.69
CTLA4P16410 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CTLA4P16410 AC011447.7-201ENST00000624228 1590 ntBASIC4.51□□□□□ -1.69
CTLA4P16410 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.51□□□□□ -1.69
CTLA4P16410 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CTLA4P16410 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CTLA4P16410 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CTLA4P16410 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CTLA4P16410 BRAFP1-201ENST00000445336 2703 ntBASIC4.51□□□□□ -1.69
CTLA4P16410 AC097063.1-201ENST00000426714 1797 ntBASIC4.5□□□□□ -1.69
CTLA4P16410 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CTLA4P16410 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms