Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.46□□□□□ -1.69
SRRM4A7MD48 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.69
SRRM4A7MD48 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.69
SRRM4A7MD48 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
SRRM4A7MD48 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.46□□□□□ -1.69
SRRM4A7MD48 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.46□□□□□ -1.7
SRRM4A7MD48 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
SRRM4A7MD48 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
SRRM4A7MD48 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.46□□□□□ -1.7
SRRM4A7MD48 OR52B3P-201ENST00000314715 928 ntBASIC4.46□□□□□ -1.7
SRRM4A7MD48 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SRRM4A7MD48 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.46□□□□□ -1.7
SRRM4A7MD48 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.46□□□□□ -1.7
SRRM4A7MD48 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SRRM4A7MD48 RPS3AP2-201ENST00000407190 754 ntBASIC4.46□□□□□ -1.7
SRRM4A7MD48 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC4.46□□□□□ -1.7
SRRM4A7MD48 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC4.46□□□□□ -1.7
SRRM4A7MD48 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC4.46□□□□□ -1.7
SRRM4A7MD48 AC009784.1-201ENST00000426484 460 ntBASIC4.46□□□□□ -1.7
SRRM4A7MD48 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC4.46□□□□□ -1.7
SRRM4A7MD48 PTP4A1P3-201ENST00000433661 420 ntBASIC4.46□□□□□ -1.7
SRRM4A7MD48 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC4.46□□□□□ -1.7
SRRM4A7MD48 CYCSP51-201ENST00000443545 318 ntBASIC4.46□□□□□ -1.7
SRRM4A7MD48 AC005297.1-201ENST00000444765 862 ntBASIC4.46□□□□□ -1.7
SRRM4A7MD48 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC4.46□□□□□ -1.7
SRRM4A7MD48 AL035551.1-201ENST00000446931 348 ntBASIC4.46□□□□□ -1.7
SRRM4A7MD48 IGBP1P3-201ENST00000447449 1000 ntBASIC4.46□□□□□ -1.7
SRRM4A7MD48 AP000547.1-201ENST00000454360 617 ntBASIC4.46□□□□□ -1.7
SRRM4A7MD48 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SRRM4A7MD48 PSAT1P4-201ENST00000466500 526 ntBASIC4.46□□□□□ -1.7
SRRM4A7MD48 OR2A1-AS1-202ENST00000467944 422 ntBASIC4.46□□□□□ -1.7
SRRM4A7MD48 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SRRM4A7MD48 UBFD1P1-201ENST00000473259 814 ntBASIC4.46□□□□□ -1.7
SRRM4A7MD48 RN7SL583P-201ENST00000475692 287 ntBASIC4.46□□□□□ -1.7
SRRM4A7MD48 RPL23AP73-201ENST00000492507 471 ntBASIC4.46□□□□□ -1.7
SRRM4A7MD48 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.46□□□□□ -1.7
SRRM4A7MD48 RPSAP51-201ENST00000497462 645 ntBASIC4.46□□□□□ -1.7
SRRM4A7MD48 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.46□□□□□ -1.7
SRRM4A7MD48 AC091912.1-201ENST00000511351 248 ntBASIC4.46□□□□□ -1.7
SRRM4A7MD48 SNORA70.11-201ENST00000515987 138 ntBASIC4.46□□□□□ -1.7
SRRM4A7MD48 RNU6-615P-201ENST00000516065 106 ntBASIC4.46□□□□□ -1.7
SRRM4A7MD48 SNORA70.13-201ENST00000516116 138 ntBASIC4.46□□□□□ -1.7
SRRM4A7MD48 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC4.46□□□□□ -1.7
SRRM4A7MD48 AC005363.1-201ENST00000530779 351 ntBASIC4.46□□□□□ -1.7
SRRM4A7MD48 TOMM20P1-201ENST00000534518 427 ntBASIC4.46□□□□□ -1.7
SRRM4A7MD48 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
SRRM4A7MD48 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SRRM4A7MD48 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.46□□□□□ -1.7
SRRM4A7MD48 AC107958.1-201ENST00000556576 290 ntBASIC4.46□□□□□ -1.7
SRRM4A7MD48 SULT1C2P2-201ENST00000562517 294 ntBASIC4.46□□□□□ -1.7
SRRM4A7MD48 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.46□□□□□ -1.7
SRRM4A7MD48 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.46□□□□□ -1.7
SRRM4A7MD48 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.46□□□□□ -1.7
SRRM4A7MD48 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.46□□□□□ -1.7
SRRM4A7MD48 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SRRM4A7MD48 H3F3BP2-201ENST00000583907 357 ntBASIC4.46□□□□□ -1.7
SRRM4A7MD48 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC4.46□□□□□ -1.7
SRRM4A7MD48 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.46□□□□□ -1.7
SRRM4A7MD48 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.46□□□□□ -1.7
SRRM4A7MD48 AL499605.1-201ENST00000604628 403 ntBASIC4.46□□□□□ -1.7
SRRM4A7MD48 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.46□□□□□ -1.7
SRRM4A7MD48 AC080188.3-201ENST00000624842 748 ntBASIC4.46□□□□□ -1.7
SRRM4A7MD48 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.46□□□□□ -1.7
SRRM4A7MD48 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.46□□□□□ -1.7
SRRM4A7MD48 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
SRRM4A7MD48 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SRRM4A7MD48 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SRRM4A7MD48 RALGAPA1P1-201ENST00000443361 6232 ntBASIC4.46□□□□□ -1.7
SRRM4A7MD48 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
SRRM4A7MD48 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SRRM4A7MD48 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SRRM4A7MD48 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.46□□□□□ -1.7
SRRM4A7MD48 AL022311.1-201ENST00000623726 19416 ntBASIC4.46□□□□□ -1.7
SRRM4A7MD48 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.46□□□□□ -1.7
SRRM4A7MD48 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SRRM4A7MD48 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SRRM4A7MD48 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SRRM4A7MD48 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SRRM4A7MD48 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SRRM4A7MD48 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.46□□□□□ -1.7
SRRM4A7MD48 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
SRRM4A7MD48 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.46□□□□□ -1.7
SRRM4A7MD48 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SRRM4A7MD48 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SRRM4A7MD48 AC106872.5-201ENST00000508856 1416 ntBASIC4.46□□□□□ -1.7
SRRM4A7MD48 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC4.46□□□□□ -1.7
SRRM4A7MD48 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SRRM4A7MD48 AP001029.2-203ENST00000589795 4910 ntBASIC4.46□□□□□ -1.7
SRRM4A7MD48 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SRRM4A7MD48 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.46□□□□□ -1.7
SRRM4A7MD48 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SRRM4A7MD48 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SRRM4A7MD48 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SRRM4A7MD48 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SRRM4A7MD48 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
SRRM4A7MD48 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SRRM4A7MD48 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SRRM4A7MD48 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SRRM4A7MD48 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.45□□□□□ -1.7
SRRM4A7MD48 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms