Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 ABCA11P-202ENST00000504019 2110 ntBASIC7.16□□□□□ -1.26
PCDHGC4Q9Y5F7 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
PCDHGC4Q9Y5F7 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PCDHGC4Q9Y5F7 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC7.16□□□□□ -1.26
PCDHGC4Q9Y5F7 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
PCDHGC4Q9Y5F7 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PCDHGC4Q9Y5F7 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PCDHGC4Q9Y5F7 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PCDHGC4Q9Y5F7 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC7.16□□□□□ -1.26
PCDHGC4Q9Y5F7 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PCDHGC4Q9Y5F7 AC097634.1-201ENST00000604491 2467 ntBASIC7.16□□□□□ -1.26
PCDHGC4Q9Y5F7 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 ENSAP3-201ENST00000312710 333 ntBASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 RN7SKP55-201ENST00000364888 307 ntBASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 RNA5SP302-201ENST00000364896 100 ntBASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 Y_RNA.419-201ENST00000384041 102 ntBASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 RNU2-42P-201ENST00000410697 113 ntBASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 RNU4-55P-201ENST00000410731 137 ntBASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 AL139135.1-201ENST00000412675 209 ntBASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 OR5W1P-201ENST00000423705 938 ntBASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 RPL22P17-201ENST00000438729 315 ntBASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 MED28P7-201ENST00000456611 530 ntBASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 RN7SL149P-201ENST00000465197 281 ntBASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 AC007537.2-201ENST00000472093 511 ntBASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 AC025271.1-201ENST00000485045 429 ntBASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 AC104108.1-201ENST00000509930 412 ntBASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 MTCO1P30-201ENST00000515244 580 ntBASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 RN7SKP233-201ENST00000517005 110 ntBASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 AC087276.1-201ENST00000529659 480 ntBASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 BNIP3P8-201ENST00000597863 560 ntBASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 AL035413.2-201ENST00000604801 525 ntBASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 MEMO1P5-201ENST00000604810 406 ntBASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 AC069304.2-201ENST00000605154 435 ntBASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 BNIP3P10-201ENST00000605360 577 ntBASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 AC063962.1-201ENST00000608199 521 ntBASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 AC008250.2-201ENST00000615261 205 ntBASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 AL161420.1-201ENST00000619393 264 ntBASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 AC012629.3-201ENST00000623397 328 ntBASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 AC087894.3-201ENST00000623682 349 ntBASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 AC006065.6-201ENST00000625201 545 ntBASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 AC026108.1-201ENST00000635444 547 ntBASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 AL121936.2-201ENST00000641935 662 ntBASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
PCDHGC4Q9Y5F7 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
PCDHGC4Q9Y5F7 AC106872.5-201ENST00000508856 1416 ntBASIC7.15□□□□□ -1.27
PCDHGC4Q9Y5F7 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
PCDHGC4Q9Y5F7 MT-RNR2-201ENST00000387347 1559 ntBASIC7.15□□□□□ -1.27
PCDHGC4Q9Y5F7 UGT2B25P-201ENST00000511504 1586 ntBASIC7.15□□□□□ -1.27
PCDHGC4Q9Y5F7 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
PCDHGC4Q9Y5F7 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
PCDHGC4Q9Y5F7 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
PCDHGC4Q9Y5F7 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
PCDHGC4Q9Y5F7 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC7.15□□□□□ -1.27
PCDHGC4Q9Y5F7 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC7.15□□□□□ -1.27
PCDHGC4Q9Y5F7 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC7.15□□□□□ -1.27
PCDHGC4Q9Y5F7 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHGC4Q9Y5F7 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC7.14□□□□□ -1.27
PCDHGC4Q9Y5F7 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHGC4Q9Y5F7 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHGC4Q9Y5F7 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHGC4Q9Y5F7 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHGC4Q9Y5F7 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHGC4Q9Y5F7 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHGC4Q9Y5F7 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHGC4Q9Y5F7 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PCDHGC4Q9Y5F7 NAP1L4P1-201ENST00000319092 1157 ntBASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms