Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 AC068870.3-201ENST00000625077 2536 ntBASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 AC010886.1-201ENST00000437380 2869 ntBASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 AC126773.4-201ENST00000612545 3043 ntBASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 U8.3-201ENST00000363321 132 ntBASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 SNORD81.2-201ENST00000365153 76 ntBASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 SNORA51.12-201ENST00000384448 134 ntBASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 RPS7P8-201ENST00000418311 581 ntBASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 PDCL2P1-201ENST00000419302 352 ntBASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 AL022100.1-202ENST00000421214 548 ntBASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 GTF2F2P2-201ENST00000445825 721 ntBASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 RPL7P59-201ENST00000447700 943 ntBASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 AC013429.1-201ENST00000456604 422 ntBASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 RPS20P20-201ENST00000460498 340 ntBASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 AC007537.2-201ENST00000472093 511 ntBASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 RN7SL516P-201ENST00000496127 297 ntBASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 NIFKP7-201ENST00000503365 834 ntBASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 RNU6-583P-201ENST00000516012 92 ntBASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 SNX18P27-201ENST00000523611 779 ntBASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 RGS5-219ENST00000528019 512 ntTSL 4 BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 AC011840.5-201ENST00000582125 771 ntBASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 MIR4307-201ENST00000582802 84 ntBASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 AL136363.1-201ENST00000605349 337 ntBASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 AL683826.1-201ENST00000624104 627 ntBASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 AC129908.1-201ENST00000624553 648 ntBASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 MEF2C-222ENST00000514028 3393 ntTSL 5 BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 AL353795.1-201ENST00000439134 1775 ntBASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PCDHB11Q9Y5F2 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 MAPK10-333ENST00000641607 2481 ntBASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 AC093225.1-201ENST00000506867 1408 ntBASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 TRIM51HP-202ENST00000530412 1823 ntBASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC7.3□□□□□ -1.24
PCDHB11Q9Y5F2 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms