Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 MTHFD2P4-201ENST00000515074 1025 ntBASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 HMGN1P9-201ENST00000515212 298 ntBASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 AP000619.2-201ENST00000546014 969 ntBASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 AC004477.3-201ENST00000614061 590 ntBASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 AC007204.2-201ENST00000615022 616 ntBASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 RPL23AP61-201ENST00000623642 466 ntBASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 OR5AC4P-202ENST00000642086 985 ntBASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 TTC39DP-201ENST00000416781 1688 ntBASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 AP000432.2-201ENST00000624164 2048 ntBASIC6.03□□□□□ -1.44
BLOC1S4Q9NUP1 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
BLOC1S4Q9NUP1 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.02□□□□□ -1.45
BLOC1S4Q9NUP1 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.02□□□□□ -1.45
BLOC1S4Q9NUP1 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.02□□□□□ -1.45
BLOC1S4Q9NUP1 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
BLOC1S4Q9NUP1 RNA5SP319-201ENST00000362768 119 ntBASIC6.02□□□□□ -1.45
BLOC1S4Q9NUP1 RNA5SP514-201ENST00000363717 111 ntBASIC6.02□□□□□ -1.45
BLOC1S4Q9NUP1 RN7SKP81-201ENST00000365603 331 ntBASIC6.02□□□□□ -1.45
BLOC1S4Q9NUP1 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.02□□□□□ -1.45
BLOC1S4Q9NUP1 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.02□□□□□ -1.45
BLOC1S4Q9NUP1 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC6.02□□□□□ -1.45
BLOC1S4Q9NUP1 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.02□□□□□ -1.45
BLOC1S4Q9NUP1 OR51A6P-201ENST00000418680 1004 ntBASIC6.02□□□□□ -1.45
BLOC1S4Q9NUP1 AC006065.1-201ENST00000422539 802 ntBASIC6.02□□□□□ -1.45
BLOC1S4Q9NUP1 AL354766.1-201ENST00000423396 542 ntBASIC6.02□□□□□ -1.45
BLOC1S4Q9NUP1 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
BLOC1S4Q9NUP1 AC090804.1-201ENST00000448870 490 ntBASIC6.02□□□□□ -1.45
BLOC1S4Q9NUP1 AL133244.1-201ENST00000456007 258 ntBASIC6.02□□□□□ -1.45
BLOC1S4Q9NUP1 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.02□□□□□ -1.45
BLOC1S4Q9NUP1 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.02□□□□□ -1.45
BLOC1S4Q9NUP1 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.02□□□□□ -1.45
BLOC1S4Q9NUP1 RNA5SP362-201ENST00000516048 118 ntBASIC6.02□□□□□ -1.45
BLOC1S4Q9NUP1 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
BLOC1S4Q9NUP1 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC6.02□□□□□ -1.45
BLOC1S4Q9NUP1 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.02□□□□□ -1.45
BLOC1S4Q9NUP1 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
BLOC1S4Q9NUP1 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.02□□□□□ -1.45
BLOC1S4Q9NUP1 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.02□□□□□ -1.45
BLOC1S4Q9NUP1 RBM22P1-201ENST00000578589 1214 ntBASIC6.02□□□□□ -1.45
BLOC1S4Q9NUP1 RN7SL356P-201ENST00000582228 248 ntBASIC6.02□□□□□ -1.45
BLOC1S4Q9NUP1 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.02□□□□□ -1.45
BLOC1S4Q9NUP1 SUGT1P3-202ENST00000604259 383 ntBASIC6.02□□□□□ -1.45
BLOC1S4Q9NUP1 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
BLOC1S4Q9NUP1 MIR8080-201ENST00000622224 89 ntBASIC6.02□□□□□ -1.45
BLOC1S4Q9NUP1 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.02□□□□□ -1.45
BLOC1S4Q9NUP1 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
BLOC1S4Q9NUP1 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
BLOC1S4Q9NUP1 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
BLOC1S4Q9NUP1 ABCC13-202ENST00000463099 3842 ntBASIC6.02□□□□□ -1.45
BLOC1S4Q9NUP1 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
BLOC1S4Q9NUP1 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 BRAFP1-201ENST00000445336 2703 ntBASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 RNA5SP132-201ENST00000364725 118 ntBASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 RN7SKP186-201ENST00000365371 303 ntBASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 OR1F12-201ENST00000402365 945 ntBASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 AL512422.1-201ENST00000407033 553 ntBASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 CHEK2P5-201ENST00000423877 246 ntBASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 AL157827.1-201ENST00000447622 132 ntBASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 AC009963.4-201ENST00000448535 339 ntBASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 MTND5P8-201ENST00000449817 1083 ntBASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 RN7SL184P-201ENST00000488308 297 ntBASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 RN7SL547P-201ENST00000490793 290 ntBASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 RPL15P21-201ENST00000495592 567 ntBASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 AC026782.2-201ENST00000510845 636 ntBASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 AC021193.1-201ENST00000511607 420 ntBASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 AC097486.1-201ENST00000515331 210 ntBASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 SCARNA16.4-201ENST00000516956 187 ntBASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 RN7SKP99-201ENST00000517028 307 ntBASIC6.01□□□□□ -1.45
BLOC1S4Q9NUP1 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 164.9 ms