Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 RN7SL170P-201ENST00000487098 295 ntBASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 AC105185.1-201ENST00000518705 535 ntBASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 COX6B1P4-201ENST00000519826 484 ntBASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 AC105233.3-201ENST00000531125 744 ntBASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 AC090115.2-201ENST00000548060 883 ntBASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 DUXAP1-201ENST00000556632 463 ntBASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 ACTR3BP3-201ENST00000565577 979 ntBASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 MIR4502-201ENST00000580432 81 ntBASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 AC095055.1-201ENST00000603472 1113 ntBASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 AL139286.2-201ENST00000606838 396 ntBASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 AP004607.9-201ENST00000618202 316 ntBASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 AC025262.3-201ENST00000623666 360 ntBASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 AC011815.3-201ENST00000624194 473 ntBASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 LINC01808-202ENST00000641680 1116 ntBASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 OR7E91P-202ENST00000642062 1198 ntBASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 AL591135.1-201ENST00000401578 5914 ntBASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 AC005332.9-201ENST00000620266 2921 ntBASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6.22□□□□□ -1.41
TRIM48Q8IWZ4 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
TRIM48Q8IWZ4 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
TRIM48Q8IWZ4 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
TRIM48Q8IWZ4 AP000526.1-201ENST00000603308 1388 ntBASIC6.21□□□□□ -1.41
TRIM48Q8IWZ4 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
TRIM48Q8IWZ4 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.41
TRIM48Q8IWZ4 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
TRIM48Q8IWZ4 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 CYCSP52-201ENST00000422857 310 ntBASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 GAPDHP34-201ENST00000432112 823 ntBASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 MTND1P1-201ENST00000445453 368 ntBASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 HMGB1P48-201ENST00000446155 598 ntBASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 AP000936.2-201ENST00000447151 681 ntBASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 RPL12P26-201ENST00000452430 487 ntBASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 AL109741.2-201ENST00000455561 343 ntBASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 RPL35AP19-201ENST00000469425 329 ntBASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 RN7SL643P-201ENST00000471845 291 ntBASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 AC104689.1-201ENST00000473356 768 ntBASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 SNX18P24-201ENST00000505249 671 ntBASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 MAST4-IT1-201ENST00000514241 658 ntBASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 RNU6-1308P-201ENST00000516817 103 ntBASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 snoZ278.1-201ENST00000517059 112 ntBASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 OR11H3P-201ENST00000554547 982 ntBASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 AC002310.3-201ENST00000569728 723 ntBASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 AL139418.1-201ENST00000613613 177 ntBASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 AC010435.1-201ENST00000623353 1177 ntBASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 RPL23AP61-201ENST00000623642 466 ntBASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 AP003072.4-201ENST00000624580 310 ntBASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms