Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
SCN1BQ07699 AC123786.2-201ENST00000603459 275 ntBASIC5.01□□□□□ -1.61
SCN1BQ07699 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.01□□□□□ -1.61
SCN1BQ07699 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.01□□□□□ -1.61
SCN1BQ07699 AC025175.1-201ENST00000606482 759 ntBASIC5.01□□□□□ -1.61
SCN1BQ07699 AL021918.2-201ENST00000613415 194 ntBASIC5.01□□□□□ -1.61
SCN1BQ07699 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.01□□□□□ -1.61
SCN1BQ07699 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.01□□□□□ -1.61
SCN1BQ07699 AC091948.2-201ENST00000636510 279 ntBASIC5.01□□□□□ -1.61
SCN1BQ07699 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.01□□□□□ -1.61
SCN1BQ07699 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SCN1BQ07699 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
SCN1BQ07699 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
SCN1BQ07699 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.01□□□□□ -1.61
SCN1BQ07699 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.01□□□□□ -1.61
SCN1BQ07699 AP000756.2-201ENST00000624168 2567 ntBASIC5.01□□□□□ -1.61
SCN1BQ07699 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
SCN1BQ07699 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
SCN1BQ07699 OFD1P9Y-201ENST00000417699 1491 ntBASIC5□□□□□ -1.61
SCN1BQ07699 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5□□□□□ -1.61
SCN1BQ07699 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5□□□□□ -1.61
SCN1BQ07699 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SCN1BQ07699 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5□□□□□ -1.61
SCN1BQ07699 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5□□□□□ -1.61
SCN1BQ07699 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5□□□□□ -1.61
SCN1BQ07699 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
SCN1BQ07699 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SCN1BQ07699 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5□□□□□ -1.61
SCN1BQ07699 OR4F13P-202ENST00000560066 2054 ntBASIC5□□□□□ -1.61
SCN1BQ07699 AC107027.3-201ENST00000565095 3473 ntBASIC5□□□□□ -1.61
SCN1BQ07699 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
SCN1BQ07699 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5□□□□□ -1.61
SCN1BQ07699 RNU6-185P-201ENST00000384421 107 ntBASIC5□□□□□ -1.61
SCN1BQ07699 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5□□□□□ -1.61
SCN1BQ07699 RNU4-74P-201ENST00000411280 161 ntBASIC5□□□□□ -1.61
SCN1BQ07699 RN7SKP108-201ENST00000411367 328 ntBASIC5□□□□□ -1.61
SCN1BQ07699 RPL6P29-201ENST00000414863 865 ntBASIC5□□□□□ -1.61
SCN1BQ07699 GAPDHP59-201ENST00000435908 267 ntBASIC5□□□□□ -1.61
SCN1BQ07699 PCBP2P1-201ENST00000437262 977 ntBASIC5□□□□□ -1.61
SCN1BQ07699 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5□□□□□ -1.61
SCN1BQ07699 AC023141.8-201ENST00000442554 208 ntBASIC5□□□□□ -1.61
SCN1BQ07699 AC007000.2-201ENST00000442564 487 ntBASIC5□□□□□ -1.61
SCN1BQ07699 TRIM60P16-201ENST00000444048 694 ntBASIC5□□□□□ -1.61
SCN1BQ07699 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5□□□□□ -1.61
SCN1BQ07699 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5□□□□□ -1.61
SCN1BQ07699 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5□□□□□ -1.61
SCN1BQ07699 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5□□□□□ -1.61
SCN1BQ07699 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5□□□□□ -1.61
SCN1BQ07699 RN7SL362P-201ENST00000494228 267 ntBASIC5□□□□□ -1.61
SCN1BQ07699 MYL12BP2-201ENST00000503948 512 ntBASIC5□□□□□ -1.61
SCN1BQ07699 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
SCN1BQ07699 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5□□□□□ -1.61
SCN1BQ07699 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5□□□□□ -1.61
SCN1BQ07699 AC079064.1-201ENST00000528365 362 ntBASIC5□□□□□ -1.61
SCN1BQ07699 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5□□□□□ -1.61
SCN1BQ07699 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5□□□□□ -1.61
SCN1BQ07699 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5□□□□□ -1.61
SCN1BQ07699 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5□□□□□ -1.61
SCN1BQ07699 AC127381.1-201ENST00000555979 939 ntBASIC5□□□□□ -1.61
SCN1BQ07699 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5□□□□□ -1.61
SCN1BQ07699 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5□□□□□ -1.61
SCN1BQ07699 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SCN1BQ07699 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5□□□□□ -1.61
SCN1BQ07699 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5□□□□□ -1.61
SCN1BQ07699 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5□□□□□ -1.61
SCN1BQ07699 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5□□□□□ -1.61
SCN1BQ07699 AC011500.1-201ENST00000601963 469 ntBASIC5□□□□□ -1.61
SCN1BQ07699 AC015849.2-201ENST00000605738 409 ntBASIC5□□□□□ -1.61
SCN1BQ07699 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5□□□□□ -1.61
SCN1BQ07699 AC110792.4-201ENST00000609843 298 ntBASIC5□□□□□ -1.61
SCN1BQ07699 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5□□□□□ -1.61
SCN1BQ07699 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5□□□□□ -1.61
SCN1BQ07699 AL080312.2-201ENST00000613001 630 ntBASIC5□□□□□ -1.61
SCN1BQ07699 HTR1DP1-201ENST00000616500 888 ntBASIC5□□□□□ -1.61
SCN1BQ07699 AL035661.1-201ENST00000620459 1144 ntBASIC5□□□□□ -1.61
SCN1BQ07699 AC007342.8-201ENST00000623278 678 ntBASIC5□□□□□ -1.61
SCN1BQ07699 AL357562.1-201ENST00000624911 609 ntBASIC5□□□□□ -1.61
SCN1BQ07699 AL357140.4-201ENST00000636827 412 ntBASIC5□□□□□ -1.61
SCN1BQ07699 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5□□□□□ -1.61
SCN1BQ07699 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5□□□□□ -1.61
SCN1BQ07699 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5□□□□□ -1.61
SCN1BQ07699 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5□□□□□ -1.61
SCN1BQ07699 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5□□□□□ -1.61
SCN1BQ07699 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5□□□□□ -1.61
SCN1BQ07699 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
SCN1BQ07699 AC144833.1-201ENST00000567953 4089 ntBASIC5□□□□□ -1.61
SCN1BQ07699 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5□□□□□ -1.61
SCN1BQ07699 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SCN1BQ07699 SOCS5P3-201ENST00000425115 1576 ntBASIC4.99□□□□□ -1.61
SCN1BQ07699 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SCN1BQ07699 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SCN1BQ07699 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SCN1BQ07699 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
SCN1BQ07699 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
SCN1BQ07699 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
SCN1BQ07699 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
SCN1BQ07699 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SCN1BQ07699 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.99□□□□□ -1.61
SCN1BQ07699 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SCN1BQ07699 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms