Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.25□□□□□ -1.57
HMGCLP35914 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.25□□□□□ -1.57
HMGCLP35914 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.25□□□□□ -1.57
HMGCLP35914 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.25□□□□□ -1.57
HMGCLP35914 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.25□□□□□ -1.57
HMGCLP35914 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
HMGCLP35914 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.25□□□□□ -1.57
HMGCLP35914 AC011626.1-201ENST00000604710 562 ntBASIC5.25□□□□□ -1.57
HMGCLP35914 AL451049.1-201ENST00000608672 497 ntBASIC5.25□□□□□ -1.57
HMGCLP35914 AC008115.4-201ENST00000619780 775 ntBASIC5.25□□□□□ -1.57
HMGCLP35914 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.25□□□□□ -1.57
HMGCLP35914 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
HMGCLP35914 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
HMGCLP35914 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.25□□□□□ -1.57
HMGCLP35914 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
HMGCLP35914 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.25□□□□□ -1.57
HMGCLP35914 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.25□□□□□ -1.57
HMGCLP35914 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HMGCLP35914 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.25□□□□□ -1.57
HMGCLP35914 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
HMGCLP35914 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.25□□□□□ -1.57
HMGCLP35914 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HMGCLP35914 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMGCLP35914 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMGCLP35914 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMGCLP35914 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.24□□□□□ -1.57
HMGCLP35914 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
HMGCLP35914 SAMMSON-213ENST00000641336 1521 ntBASIC5.24□□□□□ -1.57
HMGCLP35914 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMGCLP35914 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.24□□□□□ -1.57
HMGCLP35914 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.24□□□□□ -1.57
HMGCLP35914 U3.3-201ENST00000362986 216 ntBASIC5.24□□□□□ -1.57
HMGCLP35914 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.24□□□□□ -1.57
HMGCLP35914 AL358178.1-201ENST00000407698 397 ntBASIC5.24□□□□□ -1.57
HMGCLP35914 RNU2-22P-201ENST00000411266 212 ntBASIC5.24□□□□□ -1.57
HMGCLP35914 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HMGCLP35914 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.24□□□□□ -1.57
HMGCLP35914 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMGCLP35914 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HMGCLP35914 GAPDHP58-201ENST00000438477 1006 ntBASIC5.24□□□□□ -1.57
HMGCLP35914 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.24□□□□□ -1.57
HMGCLP35914 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.24□□□□□ -1.57
HMGCLP35914 RN7SL189P-201ENST00000468631 289 ntBASIC5.24□□□□□ -1.57
HMGCLP35914 RPS4XP1-201ENST00000482189 787 ntBASIC5.24□□□□□ -1.57
HMGCLP35914 UBA52P7-201ENST00000486088 380 ntBASIC5.24□□□□□ -1.57
HMGCLP35914 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.24□□□□□ -1.57
HMGCLP35914 AC016559.2-201ENST00000510759 359 ntBASIC5.24□□□□□ -1.57
HMGCLP35914 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.24□□□□□ -1.57
HMGCLP35914 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.24□□□□□ -1.57
HMGCLP35914 AC127381.1-201ENST00000555979 939 ntBASIC5.24□□□□□ -1.57
HMGCLP35914 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.24□□□□□ -1.57
HMGCLP35914 MIR4489-201ENST00000578869 62 ntBASIC5.24□□□□□ -1.57
HMGCLP35914 RN7SL708P-201ENST00000580952 299 ntBASIC5.24□□□□□ -1.57
HMGCLP35914 RN7SL753P-201ENST00000581238 290 ntBASIC5.24□□□□□ -1.57
HMGCLP35914 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.24□□□□□ -1.57
HMGCLP35914 AC006272.2-201ENST00000594725 163 ntBASIC5.24□□□□□ -1.57
HMGCLP35914 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.24□□□□□ -1.57
HMGCLP35914 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.24□□□□□ -1.57
HMGCLP35914 AC095055.1-201ENST00000603472 1113 ntBASIC5.24□□□□□ -1.57
HMGCLP35914 AP005131.7-201ENST00000610087 611 ntBASIC5.24□□□□□ -1.57
HMGCLP35914 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.24□□□□□ -1.57
HMGCLP35914 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.24□□□□□ -1.57
HMGCLP35914 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.24□□□□□ -1.57
HMGCLP35914 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.24□□□□□ -1.57
HMGCLP35914 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.24□□□□□ -1.57
HMGCLP35914 AC004808.2-201ENST00000627965 773 ntBASIC5.24□□□□□ -1.57
HMGCLP35914 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.24□□□□□ -1.57
HMGCLP35914 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.24□□□□□ -1.57
HMGCLP35914 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMGCLP35914 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HMGCLP35914 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMGCLP35914 TTC39DP-201ENST00000416781 1688 ntBASIC5.24□□□□□ -1.57
HMGCLP35914 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.24□□□□□ -1.57
HMGCLP35914 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMGCLP35914 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HMGCLP35914 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HMGCLP35914 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HMGCLP35914 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HMGCLP35914 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
HMGCLP35914 AC011503.2-201ENST00000594230 1500 ntBASIC5.23□□□□□ -1.57
HMGCLP35914 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
HMGCLP35914 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.23□□□□□ -1.57
HMGCLP35914 AC011493.1-201ENST00000596753 1632 ntBASIC5.23□□□□□ -1.57
HMGCLP35914 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HMGCLP35914 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.23□□□□□ -1.57
HMGCLP35914 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.23□□□□□ -1.57
HMGCLP35914 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
HMGCLP35914 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
HMGCLP35914 RNA5SP90-201ENST00000364801 99 ntBASIC5.23□□□□□ -1.57
HMGCLP35914 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
HMGCLP35914 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HMGCLP35914 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HMGCLP35914 RN7SKP229-201ENST00000410465 302 ntBASIC5.23□□□□□ -1.57
HMGCLP35914 AP000534.2-201ENST00000412729 568 ntBASIC5.23□□□□□ -1.57
HMGCLP35914 RPS4XP16-201ENST00000427198 791 ntBASIC5.23□□□□□ -1.57
HMGCLP35914 NFYAP1-201ENST00000431953 972 ntBASIC5.23□□□□□ -1.57
HMGCLP35914 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.23□□□□□ -1.57
HMGCLP35914 TPTE2P1-204ENST00000435256 593 ntBASIC5.23□□□□□ -1.57
HMGCLP35914 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.23□□□□□ -1.57
HMGCLP35914 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms