Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
RPA3P35244 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
RPA3P35244 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
RPA3P35244 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
RPA3P35244 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
RPA3P35244 TCP1P3-201ENST00000414406 1498 ntBASIC5.21□□□□□ -1.58
RPA3P35244 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.21□□□□□ -1.58
RPA3P35244 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RPA3P35244 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.21□□□□□ -1.58
RPA3P35244 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.21□□□□□ -1.58
RPA3P35244 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
RPA3P35244 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
RPA3P35244 MIR133B-201ENST00000362210 119 ntBASIC5.21□□□□□ -1.58
RPA3P35244 RN7SKP160-201ENST00000363804 340 ntBASIC5.21□□□□□ -1.58
RPA3P35244 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.21□□□□□ -1.58
RPA3P35244 AC092642.1-201ENST00000392417 425 ntBASIC5.21□□□□□ -1.58
RPA3P35244 OR4K12P-201ENST00000406538 961 ntBASIC5.21□□□□□ -1.58
RPA3P35244 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.21□□□□□ -1.58
RPA3P35244 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.21□□□□□ -1.58
RPA3P35244 DSTNP5-201ENST00000427921 523 ntBASIC5.21□□□□□ -1.58
RPA3P35244 RPL12P18-201ENST00000437175 325 ntBASIC5.21□□□□□ -1.58
RPA3P35244 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.21□□□□□ -1.58
RPA3P35244 AL136455.1-201ENST00000441083 1240 ntBASIC5.21□□□□□ -1.58
RPA3P35244 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.21□□□□□ -1.58
RPA3P35244 HMGB3P16-201ENST00000508037 287 ntBASIC5.21□□□□□ -1.58
RPA3P35244 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.21□□□□□ -1.58
RPA3P35244 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.21□□□□□ -1.58
RPA3P35244 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.21□□□□□ -1.58
RPA3P35244 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.21□□□□□ -1.58
RPA3P35244 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.21□□□□□ -1.58
RPA3P35244 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.21□□□□□ -1.58
RPA3P35244 RBM22P1-201ENST00000578589 1214 ntBASIC5.21□□□□□ -1.58
RPA3P35244 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.21□□□□□ -1.58
RPA3P35244 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.21□□□□□ -1.58
RPA3P35244 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.21□□□□□ -1.58
RPA3P35244 AC005252.1-201ENST00000604518 1063 ntBASIC5.21□□□□□ -1.58
RPA3P35244 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.21□□□□□ -1.58
RPA3P35244 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.21□□□□□ -1.58
RPA3P35244 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
RPA3P35244 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.21□□□□□ -1.58
RPA3P35244 AP001642.1-201ENST00000624727 2117 ntBASIC5.21□□□□□ -1.58
RPA3P35244 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
RPA3P35244 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RPA3P35244 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
RPA3P35244 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.21□□□□□ -1.58
RPA3P35244 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.2□□□□□ -1.58
RPA3P35244 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RPA3P35244 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.2□□□□□ -1.58
RPA3P35244 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RPA3P35244 RN7SKP269-201ENST00000365545 319 ntBASIC5.2□□□□□ -1.58
RPA3P35244 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
RPA3P35244 UBBP2-201ENST00000376781 231 ntBASIC5.2□□□□□ -1.58
RPA3P35244 AL035079.1-201ENST00000405210 287 ntBASIC5.2□□□□□ -1.58
RPA3P35244 RNA5SP487-201ENST00000410186 122 ntBASIC5.2□□□□□ -1.58
RPA3P35244 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RPA3P35244 FAM96AP1-201ENST00000430879 482 ntBASIC5.2□□□□□ -1.58
RPA3P35244 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RPA3P35244 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.2□□□□□ -1.58
RPA3P35244 GAPDHP25-201ENST00000447061 1001 ntBASIC5.2□□□□□ -1.58
RPA3P35244 MRPL35P2-201ENST00000448009 511 ntBASIC5.2□□□□□ -1.58
RPA3P35244 RPL7P39-201ENST00000481157 744 ntBASIC5.2□□□□□ -1.58
RPA3P35244 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
RPA3P35244 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.2□□□□□ -1.58
RPA3P35244 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.2□□□□□ -1.58
RPA3P35244 BNIP3P1-201ENST00000547295 580 ntBASIC5.2□□□□□ -1.58
RPA3P35244 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RPA3P35244 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RPA3P35244 RN7SL435P-201ENST00000584418 282 ntBASIC5.2□□□□□ -1.58
RPA3P35244 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.2□□□□□ -1.58
RPA3P35244 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
RPA3P35244 AC008814.1-201ENST00000603797 406 ntBASIC5.2□□□□□ -1.58
RPA3P35244 WBP1LP8-201ENST00000617401 327 ntBASIC5.2□□□□□ -1.58
RPA3P35244 MIR6837-201ENST00000620884 64 ntBASIC5.2□□□□□ -1.58
RPA3P35244 AC007996.1-201ENST00000620414 2821 ntBASIC5.2□□□□□ -1.58
RPA3P35244 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.2□□□□□ -1.58
RPA3P35244 AC011447.7-201ENST00000624228 1590 ntBASIC5.2□□□□□ -1.58
RPA3P35244 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RPA3P35244 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RPA3P35244 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
RPA3P35244 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.2□□□□□ -1.58
RPA3P35244 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
RPA3P35244 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RPA3P35244 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.19□□□□□ -1.58
RPA3P35244 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RPA3P35244 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RPA3P35244 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
RPA3P35244 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RPA3P35244 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.19□□□□□ -1.58
RPA3P35244 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.19□□□□□ -1.58
RPA3P35244 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.19□□□□□ -1.58
RPA3P35244 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
RPA3P35244 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.19□□□□□ -1.58
RPA3P35244 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
RPA3P35244 AL078599.1-201ENST00000402075 293 ntBASIC5.19□□□□□ -1.58
RPA3P35244 AL390316.1-201ENST00000406279 553 ntBASIC5.19□□□□□ -1.58
RPA3P35244 AL390774.1-201ENST00000411924 246 ntBASIC5.19□□□□□ -1.58
RPA3P35244 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.19□□□□□ -1.58
RPA3P35244 NPM1P4-201ENST00000414095 812 ntBASIC5.19□□□□□ -1.58
RPA3P35244 AC013429.2-201ENST00000418798 781 ntBASIC5.19□□□□□ -1.58
RPA3P35244 AC079355.1-201ENST00000421770 223 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms