Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 RPS5P7-201ENST00000456664 608 ntBASIC8.57□□□□□ -1.04
CFTRP13569 FAM133DP-201ENST00000464802 691 ntBASIC8.57□□□□□ -1.04
CFTRP13569 RN7SL817P-201ENST00000480777 288 ntBASIC8.57□□□□□ -1.04
CFTRP13569 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC8.57□□□□□ -1.04
CFTRP13569 RNU2-30P-201ENST00000516209 141 ntBASIC8.57□□□□□ -1.04
CFTRP13569 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CFTRP13569 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC8.57□□□□□ -1.04
CFTRP13569 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC8.57□□□□□ -1.04
CFTRP13569 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC8.57□□□□□ -1.04
CFTRP13569 AC008782.1-201ENST00000603386 430 ntBASIC8.57□□□□□ -1.04
CFTRP13569 AC093765.1-201ENST00000603758 881 ntBASIC8.57□□□□□ -1.04
CFTRP13569 AC067959.1-201ENST00000604334 379 ntBASIC8.57□□□□□ -1.04
CFTRP13569 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
CFTRP13569 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
CFTRP13569 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CFTRP13569 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CFTRP13569 DCN-218ENST00000551354 2924 ntTSL 3 BASIC8.56□□□□□ -1.04
CFTRP13569 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
CFTRP13569 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC8.56□□□□□ -1.04
CFTRP13569 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CFTRP13569 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CFTRP13569 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC8.56□□□□□ -1.04
CFTRP13569 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CFTRP13569 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC8.56□□□□□ -1.04
CFTRP13569 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
CFTRP13569 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
CFTRP13569 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CFTRP13569 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CFTRP13569 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC8.56□□□□□ -1.04
CFTRP13569 RPL31-204ENST00000409038 817 ntTSL 2 BASIC8.56□□□□□ -1.04
CFTRP13569 AC100784.1-201ENST00000522790 310 ntBASIC8.56□□□□□ -1.04
CFTRP13569 OR8G5-201ENST00000524943 1041 ntBASIC8.56□□□□□ -1.04
CFTRP13569 AP001804.1-201ENST00000526868 919 ntBASIC8.56□□□□□ -1.04
CFTRP13569 AC084824.1-201ENST00000550917 1005 ntBASIC8.56□□□□□ -1.04
CFTRP13569 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CFTRP13569 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC8.56□□□□□ -1.04
CFTRP13569 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC8.56□□□□□ -1.04
CFTRP13569 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC8.56□□□□□ -1.04
CFTRP13569 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC8.56□□□□□ -1.04
CFTRP13569 DMD-222ENST00000474231 5209 ntTSL 5 BASIC8.56□□□□□ -1.04
CFTRP13569 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC8.56□□□□□ -1.04
CFTRP13569 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC8.55□□□□□ -1.04
CFTRP13569 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
CFTRP13569 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC8.55□□□□□ -1.04
CFTRP13569 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CFTRP13569 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
CFTRP13569 RNA5SP345-201ENST00000410646 108 ntBASIC8.55□□□□□ -1.04
CFTRP13569 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC8.55□□□□□ -1.04
CFTRP13569 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC8.55□□□□□ -1.04
CFTRP13569 AC009238.2-201ENST00000431026 355 ntBASIC8.55□□□□□ -1.04
CFTRP13569 SLC25A15P5-201ENST00000508033 253 ntBASIC8.55□□□□□ -1.04
CFTRP13569 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC8.55□□□□□ -1.04
CFTRP13569 AC138701.1-201ENST00000524329 714 ntBASIC8.55□□□□□ -1.04
CFTRP13569 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC8.55□□□□□ -1.04
CFTRP13569 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC8.55□□□□□ -1.04
CFTRP13569 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC8.55□□□□□ -1.04
CFTRP13569 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC8.55□□□□□ -1.04
CFTRP13569 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CFTRP13569 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC8.55□□□□□ -1.04
CFTRP13569 STK3-216ENST00000523601 3107 ntTSL 2 BASIC8.55□□□□□ -1.04
CFTRP13569 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC8.55□□□□□ -1.04
CFTRP13569 ECM1P2-201ENST00000503354 1577 ntBASIC8.54□□□□□ -1.04
CFTRP13569 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
CFTRP13569 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CFTRP13569 AC125257.1-201ENST00000560400 2930 ntBASIC8.54□□□□□ -1.04
CFTRP13569 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
CFTRP13569 AC006065.1-201ENST00000422539 802 ntBASIC8.54□□□□□ -1.04
CFTRP13569 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC8.54□□□□□ -1.04
CFTRP13569 RPL7AP10-201ENST00000481016 791 ntBASIC8.54□□□□□ -1.04
CFTRP13569 AC022133.1-201ENST00000490961 571 ntBASIC8.54□□□□□ -1.04
CFTRP13569 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC8.54□□□□□ -1.04
CFTRP13569 RNA5SP464-201ENST00000516251 108 ntBASIC8.54□□□□□ -1.04
CFTRP13569 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC8.54□□□□□ -1.04
CFTRP13569 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC8.54□□□□□ -1.04
CFTRP13569 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CFTRP13569 AC087821.1-201ENST00000623639 567 ntBASIC8.54□□□□□ -1.04
CFTRP13569 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC8.54□□□□□ -1.04
CFTRP13569 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
CFTRP13569 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
CFTRP13569 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC8.54□□□□□ -1.04
CFTRP13569 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC8.54□□□□□ -1.04
CFTRP13569 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
CFTRP13569 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
CFTRP13569 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CFTRP13569 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CFTRP13569 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC8.54□□□□□ -1.04
CFTRP13569 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CFTRP13569 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC8.53□□□□□ -1.04
CFTRP13569 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CFTRP13569 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
CFTRP13569 IGKV7-3-201ENST00000357453 298 ntBASIC8.53□□□□□ -1.04
CFTRP13569 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
CFTRP13569 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC8.53□□□□□ -1.04
CFTRP13569 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC8.53□□□□□ -1.04
CFTRP13569 RPS27AP6-201ENST00000427962 448 ntBASIC8.53□□□□□ -1.04
CFTRP13569 RPL12P28-201ENST00000430852 489 ntBASIC8.53□□□□□ -1.04
CFTRP13569 NPM1P33-201ENST00000438918 872 ntBASIC8.53□□□□□ -1.04
CFTRP13569 AC090804.1-201ENST00000448870 490 ntBASIC8.53□□□□□ -1.04
CFTRP13569 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC8.53□□□□□ -1.04
CFTRP13569 AC109327.1-201ENST00000471666 403 ntBASIC8.53□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 161.1 ms