Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SCN2BO60939 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SCN2BO60939 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
SCN2BO60939 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SCN2BO60939 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.98□□□□□ -1.61
SCN2BO60939 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
SCN2BO60939 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
SCN2BO60939 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.98□□□□□ -1.61
SCN2BO60939 RNA5SP335-201ENST00000363817 110 ntBASIC4.98□□□□□ -1.61
SCN2BO60939 RNA5SP296-201ENST00000410523 111 ntBASIC4.98□□□□□ -1.61
SCN2BO60939 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.98□□□□□ -1.61
SCN2BO60939 AP000281.1-201ENST00000444036 316 ntBASIC4.98□□□□□ -1.61
SCN2BO60939 AC073909.1-201ENST00000447112 999 ntBASIC4.98□□□□□ -1.61
SCN2BO60939 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.98□□□□□ -1.61
SCN2BO60939 NIFKP7-201ENST00000503365 834 ntBASIC4.98□□□□□ -1.61
SCN2BO60939 TMEM97P2-201ENST00000517841 403 ntBASIC4.98□□□□□ -1.61
SCN2BO60939 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.98□□□□□ -1.61
SCN2BO60939 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.98□□□□□ -1.61
SCN2BO60939 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.98□□□□□ -1.61
SCN2BO60939 AC084759.1-201ENST00000561168 290 ntBASIC4.98□□□□□ -1.61
SCN2BO60939 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.98□□□□□ -1.61
SCN2BO60939 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.98□□□□□ -1.61
SCN2BO60939 QTRT1P1-201ENST00000604344 1078 ntBASIC4.98□□□□□ -1.61
SCN2BO60939 AC005252.1-201ENST00000604518 1063 ntBASIC4.98□□□□□ -1.61
SCN2BO60939 AC010245.2-201ENST00000606908 1167 ntBASIC4.98□□□□□ -1.61
SCN2BO60939 RN7SL787P-201ENST00000613000 284 ntBASIC4.98□□□□□ -1.61
SCN2BO60939 AC108359.1-201ENST00000616451 1211 ntBASIC4.98□□□□□ -1.61
SCN2BO60939 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.98□□□□□ -1.61
SCN2BO60939 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SCN2BO60939 CASC19-248ENST00000641674 1356 ntBASIC4.98□□□□□ -1.61
SCN2BO60939 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.98□□□□□ -1.61
SCN2BO60939 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SCN2BO60939 SOCS5P3-201ENST00000425115 1576 ntBASIC4.98□□□□□ -1.61
SCN2BO60939 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.98□□□□□ -1.61
SCN2BO60939 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
SCN2BO60939 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
SCN2BO60939 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SCN2BO60939 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SCN2BO60939 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SCN2BO60939 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SCN2BO60939 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SCN2BO60939 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.97□□□□□ -1.61
SCN2BO60939 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SCN2BO60939 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SCN2BO60939 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SCN2BO60939 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SCN2BO60939 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SCN2BO60939 AC017079.1-201ENST00000333650 415 ntBASIC4.97□□□□□ -1.61
SCN2BO60939 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.97□□□□□ -1.61
SCN2BO60939 GAPDHP15-201ENST00000398586 975 ntBASIC4.97□□□□□ -1.61
SCN2BO60939 AL391422.1-201ENST00000402155 436 ntBASIC4.97□□□□□ -1.61
SCN2BO60939 RNA5SP487-201ENST00000410186 122 ntBASIC4.97□□□□□ -1.61
SCN2BO60939 CTSL3P-202ENST00000412179 788 ntBASIC4.97□□□□□ -1.61
SCN2BO60939 SDHDP6-201ENST00000414693 480 ntBASIC4.97□□□□□ -1.61
SCN2BO60939 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.97□□□□□ -1.61
SCN2BO60939 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.97□□□□□ -1.61
SCN2BO60939 CLUHP1-201ENST00000435012 1190 ntBASIC4.97□□□□□ -1.61
SCN2BO60939 AC012075.1-201ENST00000436549 580 ntBASIC4.97□□□□□ -1.61
SCN2BO60939 RPL7AP61-201ENST00000443410 636 ntBASIC4.97□□□□□ -1.61
SCN2BO60939 HMGN1P36-201ENST00000446623 298 ntBASIC4.97□□□□□ -1.61
SCN2BO60939 AL157385.1-201ENST00000446973 268 ntBASIC4.97□□□□□ -1.61
SCN2BO60939 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.97□□□□□ -1.61
SCN2BO60939 RPS27AP2-201ENST00000457576 465 ntBASIC4.97□□□□□ -1.61
SCN2BO60939 AC245028.2-201ENST00000458673 253 ntBASIC4.97□□□□□ -1.61
SCN2BO60939 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.97□□□□□ -1.61
SCN2BO60939 AC090568.1-201ENST00000509499 856 ntBASIC4.97□□□□□ -1.61
SCN2BO60939 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.97□□□□□ -1.61
SCN2BO60939 AC006427.1-201ENST00000514359 712 ntBASIC4.97□□□□□ -1.61
SCN2BO60939 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.97□□□□□ -1.61
SCN2BO60939 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.97□□□□□ -1.61
SCN2BO60939 RBM22P1-201ENST00000578589 1214 ntBASIC4.97□□□□□ -1.61
SCN2BO60939 RN7SL708P-201ENST00000580952 299 ntBASIC4.97□□□□□ -1.61
SCN2BO60939 MIR4472-2-201ENST00000582069 67 ntBASIC4.97□□□□□ -1.61
SCN2BO60939 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.97□□□□□ -1.61
SCN2BO60939 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.97□□□□□ -1.61
SCN2BO60939 RNA5SP440-201ENST00000612665 119 ntBASIC4.97□□□□□ -1.61
SCN2BO60939 AC127024.6-201ENST00000621598 424 ntBASIC4.97□□□□□ -1.61
SCN2BO60939 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.97□□□□□ -1.61
SCN2BO60939 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SCN2BO60939 AC073869.10-201ENST00000642016 354 ntBASIC4.97□□□□□ -1.61
SCN2BO60939 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
SCN2BO60939 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
SCN2BO60939 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SCN2BO60939 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.97□□□□□ -1.61
SCN2BO60939 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SCN2BO60939 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SCN2BO60939 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.97□□□□□ -1.61
SCN2BO60939 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
SCN2BO60939 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
SCN2BO60939 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
SCN2BO60939 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SCN2BO60939 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SCN2BO60939 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SCN2BO60939 RN7SKP74-201ENST00000362849 309 ntBASIC4.96□□□□□ -1.62
SCN2BO60939 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SCN2BO60939 RNU1-74P-201ENST00000384108 171 ntBASIC4.96□□□□□ -1.62
SCN2BO60939 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.96□□□□□ -1.62
SCN2BO60939 DSTNP5-201ENST00000427921 523 ntBASIC4.96□□□□□ -1.62
SCN2BO60939 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.96□□□□□ -1.62
SCN2BO60939 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms