Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC5.4□□□□□ -1.54
HOXA3O43365 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC5.4□□□□□ -1.54
HOXA3O43365 MTATP6P13-201ENST00000438531 667 ntBASIC5.4□□□□□ -1.54
HOXA3O43365 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HOXA3O43365 AC009263.1-201ENST00000441193 1239 ntBASIC5.4□□□□□ -1.54
HOXA3O43365 COX6CP2-201ENST00000444980 225 ntBASIC5.4□□□□□ -1.54
HOXA3O43365 CDC27P1-201ENST00000445384 715 ntBASIC5.4□□□□□ -1.54
HOXA3O43365 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HOXA3O43365 AL020997.1-201ENST00000446554 349 ntBASIC5.4□□□□□ -1.54
HOXA3O43365 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.4□□□□□ -1.54
HOXA3O43365 RFC5P1-201ENST00000454419 874 ntBASIC5.4□□□□□ -1.54
HOXA3O43365 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.4□□□□□ -1.54
HOXA3O43365 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.4□□□□□ -1.54
HOXA3O43365 AC021205.1-201ENST00000468797 348 ntBASIC5.4□□□□□ -1.54
HOXA3O43365 AC005017.1-201ENST00000482002 490 ntBASIC5.4□□□□□ -1.54
HOXA3O43365 SCG5-207ENST00000497208 949 ntTSL 5 BASIC5.4□□□□□ -1.54
HOXA3O43365 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.4□□□□□ -1.54
HOXA3O43365 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.4□□□□□ -1.54
HOXA3O43365 AL390198.2-201ENST00000510553 222 ntBASIC5.4□□□□□ -1.54
HOXA3O43365 AC093664.1-201ENST00000511779 289 ntBASIC5.4□□□□□ -1.54
HOXA3O43365 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
HOXA3O43365 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC5.4□□□□□ -1.54
HOXA3O43365 MTCYBP41-201ENST00000528913 1123 ntBASIC5.4□□□□□ -1.54
HOXA3O43365 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC5.4□□□□□ -1.54
HOXA3O43365 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC5.4□□□□□ -1.54
HOXA3O43365 DUX4L52-201ENST00000549363 777 ntBASIC5.4□□□□□ -1.54
HOXA3O43365 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.4□□□□□ -1.54
HOXA3O43365 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC5.4□□□□□ -1.54
HOXA3O43365 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.4□□□□□ -1.54
HOXA3O43365 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC5.4□□□□□ -1.54
HOXA3O43365 EIF1P4-201ENST00000572664 335 ntBASIC5.4□□□□□ -1.54
HOXA3O43365 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.4□□□□□ -1.54
HOXA3O43365 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.4□□□□□ -1.54
HOXA3O43365 CTSLP2-201ENST00000580501 394 ntBASIC5.4□□□□□ -1.54
HOXA3O43365 SS18L2P2-201ENST00000583960 235 ntBASIC5.4□□□□□ -1.54
HOXA3O43365 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.4□□□□□ -1.54
HOXA3O43365 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC5.4□□□□□ -1.54
HOXA3O43365 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC5.4□□□□□ -1.54
HOXA3O43365 AP002360.4-201ENST00000606980 481 ntBASIC5.4□□□□□ -1.54
HOXA3O43365 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC5.4□□□□□ -1.54
HOXA3O43365 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.4□□□□□ -1.54
HOXA3O43365 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
HOXA3O43365 AC100793.4-201ENST00000613683 429 ntBASIC5.4□□□□□ -1.54
HOXA3O43365 AC026951.2-201ENST00000613847 241 ntBASIC5.4□□□□□ -1.54
HOXA3O43365 AL136981.2-201ENST00000617319 734 ntBASIC5.4□□□□□ -1.54
HOXA3O43365 AC091932.2-201ENST00000623014 291 ntBASIC5.4□□□□□ -1.54
HOXA3O43365 AC006840.1-201ENST00000623069 542 ntBASIC5.4□□□□□ -1.54
HOXA3O43365 SNORA16A-202ENST00000628458 135 ntBASIC5.4□□□□□ -1.54
HOXA3O43365 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.4□□□□□ -1.54
HOXA3O43365 AC127502.3-201ENST00000636170 1206 ntBASIC5.4□□□□□ -1.54
HOXA3O43365 AC183089.2-201ENST00000637931 916 ntBASIC5.4□□□□□ -1.54
HOXA3O43365 AL596275.2-203ENST00000641951 371 ntBASIC5.4□□□□□ -1.54
HOXA3O43365 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HOXA3O43365 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
HOXA3O43365 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HOXA3O43365 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HOXA3O43365 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.55
HOXA3O43365 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC5.4□□□□□ -1.55
HOXA3O43365 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC5.4□□□□□ -1.55
HOXA3O43365 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.4□□□□□ -1.55
HOXA3O43365 WBP11P1-201ENST00000562560 1931 ntBASIC5.4□□□□□ -1.55
HOXA3O43365 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HOXA3O43365 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HOXA3O43365 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HOXA3O43365 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC5.4□□□□□ -1.55
HOXA3O43365 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HOXA3O43365 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC5.4□□□□□ -1.55
HOXA3O43365 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC5.4□□□□□ -1.55
HOXA3O43365 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC5.4□□□□□ -1.55
HOXA3O43365 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC5.4□□□□□ -1.55
HOXA3O43365 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HOXA3O43365 AC106872.5-201ENST00000508856 1416 ntBASIC5.4□□□□□ -1.55
HOXA3O43365 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC5.4□□□□□ -1.55
HOXA3O43365 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
HOXA3O43365 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXA3O43365 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HOXA3O43365 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HOXA3O43365 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
HOXA3O43365 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXA3O43365 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HOXA3O43365 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.39□□□□□ -1.55
HOXA3O43365 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXA3O43365 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HOXA3O43365 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.39□□□□□ -1.55
HOXA3O43365 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXA3O43365 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HOXA3O43365 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HOXA3O43365 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
HOXA3O43365 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXA3O43365 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
HOXA3O43365 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXA3O43365 RNU4-21P-201ENST00000362802 126 ntBASIC5.39□□□□□ -1.55
HOXA3O43365 RNU1-24P-201ENST00000364285 165 ntBASIC5.39□□□□□ -1.55
HOXA3O43365 RNU1-55P-201ENST00000365510 158 ntBASIC5.39□□□□□ -1.55
HOXA3O43365 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
HOXA3O43365 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.39□□□□□ -1.55
HOXA3O43365 SNORD65.1-201ENST00000390889 71 ntBASIC5.39□□□□□ -1.55
HOXA3O43365 RPL9P21-201ENST00000392269 505 ntBASIC5.39□□□□□ -1.55
HOXA3O43365 SLC9B1P2-201ENST00000398120 1184 ntBASIC5.39□□□□□ -1.55
HOXA3O43365 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms