Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC023598.1-201ENST00000472521 361 ntBASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 AC005550.2-201ENST00000476382 318 ntBASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 RPS3AP14-201ENST00000483907 780 ntBASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 MTCO1P30-201ENST00000515244 580 ntBASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 RNU6-1004P-201ENST00000516584 111 ntBASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 Y_RNA.693-201ENST00000516641 110 ntBASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 CA1-215ENST00000522389 551 ntTSL 3 BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 SNX18P27-201ENST00000523611 779 ntBASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 AP002748.2-201ENST00000528671 348 ntBASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 SSU72P6-201ENST00000532644 488 ntBASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 AC011611.1-201ENST00000552179 197 ntBASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 AL355375.2-201ENST00000574825 175 ntBASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 MIR4666A-201ENST00000580160 79 ntBASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 AP001004.1-201ENST00000582468 324 ntBASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 BNIP3P8-201ENST00000597863 560 ntBASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 AC007687.1-201ENST00000602704 304 ntBASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 ANKRD20A19P-203ENST00000602724 295 ntBASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 AP001506.1-201ENST00000615444 211 ntBASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 AL603758.1-201ENST00000618654 241 ntBASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 BX005040.2-201ENST00000620504 370 ntBASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 AC103564.3-201ENST00000621194 220 ntBASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 AC005383.1-201ENST00000622689 534 ntBASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 AP000648.2-201ENST00000624182 404 ntBASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 AC116563.2-201ENST00000624751 535 ntBASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 AC073488.8-201ENST00000631952 757 ntBASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 ZFP42-203ENST00000618147 2338 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 AC138915.3-201ENST00000562908 1389 ntBASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 MKI67P1-201ENST00000604297 1460 ntBASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CUEDC1Q9NWM3 IMMTP1-201ENST00000435590 2219 ntBASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 DYNC1I2P1-201ENST00000435916 1838 ntBASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 AC061975.5-201ENST00000584928 1441 ntBASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 AC008555.1-201ENST00000561778 2757 ntBASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 RPL21P132-201ENST00000331267 462 ntBASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 RNA5SP218-201ENST00000363188 109 ntBASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 Y_RNA.132-201ENST00000363421 102 ntBASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 RNU6-483P-201ENST00000384088 108 ntBASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 ERMN-204ENST00000409925 556 ntTSL 4 BASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 RN7SKP225-201ENST00000410405 352 ntBASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 RN7SKP236-201ENST00000410635 284 ntBASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 SNX18P14-201ENST00000429308 574 ntBASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 AC009299.1-201ENST00000429684 717 ntBASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 MTCO1P54-201ENST00000430139 712 ntBASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 BRK1P2-201ENST00000442875 223 ntBASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 FTH1P7-201ENST00000450676 552 ntBASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 OR52E7P-201ENST00000452394 933 ntBASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 AL121877.1-201ENST00000453704 622 ntBASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 MRPS21P1-201ENST00000453850 223 ntBASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 PTMAP1-205ENST00000455552 325 ntBASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 RN7SL776P-201ENST00000493390 268 ntBASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 AC087808.1-201ENST00000520501 361 ntBASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 RGS4-207ENST00000527809 817 ntTSL 4 BASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC7.29□□□□□ -1.24
CUEDC1Q9NWM3 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms