Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 LINC02128-205ENST00000641755 1334 ntBASIC9.51□□□□□ -0.89
RTN4Q9NQC3 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
RTN4Q9NQC3 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC9.51□□□□□ -0.89
RTN4Q9NQC3 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
RTN4Q9NQC3 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
RTN4Q9NQC3 ALDOB-203ENST00000616752 1391 ntTSL 5 BASIC9.5□□□□□ -0.89
RTN4Q9NQC3 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
RTN4Q9NQC3 SAGE2P-201ENST00000420011 2126 ntBASIC9.5□□□□□ -0.89
RTN4Q9NQC3 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
RTN4Q9NQC3 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC9.5□□□□□ -0.89
RTN4Q9NQC3 AC010928.1-201ENST00000592477 1447 ntBASIC9.5□□□□□ -0.89
RTN4Q9NQC3 PCBD2-204ENST00000512783 5621 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
RTN4Q9NQC3 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
RTN4Q9NQC3 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
RTN4Q9NQC3 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
RTN4Q9NQC3 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
RTN4Q9NQC3 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
RTN4Q9NQC3 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC9.5□□□□□ -0.89
RTN4Q9NQC3 OR7G3-201ENST00000305444 939 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
RTN4Q9NQC3 GSTZ1-203ENST00000361389 1010 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
RTN4Q9NQC3 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
RTN4Q9NQC3 SNORA48-201ENST00000386847 135 ntBASIC9.5□□□□□ -0.89
RTN4Q9NQC3 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC9.5□□□□□ -0.89
RTN4Q9NQC3 FTH1P26-201ENST00000406512 701 ntBASIC9.5□□□□□ -0.89
RTN4Q9NQC3 U3.33-201ENST00000408117 204 ntBASIC9.5□□□□□ -0.89
RTN4Q9NQC3 RNU2-21P-201ENST00000410368 188 ntBASIC9.5□□□□□ -0.89
RTN4Q9NQC3 SEM1-203ENST00000413065 661 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
RTN4Q9NQC3 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC9.5□□□□□ -0.89
RTN4Q9NQC3 E2F4P1-201ENST00000422443 1133 ntBASIC9.5□□□□□ -0.89
RTN4Q9NQC3 RGS17P1-201ENST00000423358 553 ntBASIC9.5□□□□□ -0.89
RTN4Q9NQC3 RPS26P47-201ENST00000427219 348 ntBASIC9.5□□□□□ -0.89
RTN4Q9NQC3 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC9.5□□□□□ -0.89
RTN4Q9NQC3 CEACAMP1-201ENST00000434624 1035 ntBASIC9.5□□□□□ -0.89
RTN4Q9NQC3 AC006335.2-201ENST00000437993 330 ntBASIC9.5□□□□□ -0.89
RTN4Q9NQC3 SNX18P2-201ENST00000438540 808 ntBASIC9.5□□□□□ -0.89
RTN4Q9NQC3 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC9.5□□□□□ -0.89
RTN4Q9NQC3 MTND1P9-201ENST00000453775 944 ntBASIC9.5□□□□□ -0.89
RTN4Q9NQC3 ARAFP3-201ENST00000454154 490 ntBASIC9.5□□□□□ -0.89
RTN4Q9NQC3 AL121929.1-201ENST00000457120 524 ntTSL 3 BASIC9.5□□□□□ -0.89
RTN4Q9NQC3 UBDP1-202ENST00000457888 382 ntBASIC9.5□□□□□ -0.89
RTN4Q9NQC3 RNU6-420P-201ENST00000458780 107 ntBASIC9.5□□□□□ -0.89
RTN4Q9NQC3 ENPP7P2-201ENST00000462675 943 ntBASIC9.5□□□□□ -0.89
RTN4Q9NQC3 AC063943.1-201ENST00000465434 453 ntBASIC9.5□□□□□ -0.89
RTN4Q9NQC3 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC9.5□□□□□ -0.89
RTN4Q9NQC3 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC9.5□□□□□ -0.89
RTN4Q9NQC3 RNA5SP101-201ENST00000517036 108 ntBASIC9.5□□□□□ -0.89
RTN4Q9NQC3 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC9.5□□□□□ -0.89
RTN4Q9NQC3 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC9.5□□□□□ -0.89
RTN4Q9NQC3 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
RTN4Q9NQC3 BRWD1P2-201ENST00000546823 340 ntBASIC9.5□□□□□ -0.89
RTN4Q9NQC3 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC9.5□□□□□ -0.89
RTN4Q9NQC3 AL109766.1-201ENST00000555080 552 ntBASIC9.5□□□□□ -0.89
RTN4Q9NQC3 FRG2KP-201ENST00000565692 971 ntTSL 3 BASIC9.5□□□□□ -0.89
RTN4Q9NQC3 MIR3146-201ENST00000580367 79 ntBASIC9.5□□□□□ -0.89
RTN4Q9NQC3 STARD6-204ENST00000584040 660 ntTSL 3 BASIC9.5□□□□□ -0.89
RTN4Q9NQC3 AC011477.5-201ENST00000586571 259 ntBASIC9.5□□□□□ -0.89
RTN4Q9NQC3 LINC00649-209ENST00000597626 612 ntTSL 5 BASIC9.5□□□□□ -0.89
RTN4Q9NQC3 AC087283.1-201ENST00000604029 1074 ntBASIC9.5□□□□□ -0.89
RTN4Q9NQC3 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC9.5□□□□□ -0.89
RTN4Q9NQC3 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC9.5□□□□□ -0.89
RTN4Q9NQC3 Z95327.3-201ENST00000610385 572 ntBASIC9.5□□□□□ -0.89
RTN4Q9NQC3 DISC2.1-201ENST00000612827 205 ntBASIC9.5□□□□□ -0.89
RTN4Q9NQC3 Metazoa_SRP.140-201ENST00000613842 252 ntBASIC9.5□□□□□ -0.89
RTN4Q9NQC3 AC010133.1-201ENST00000615809 842 ntBASIC9.5□□□□□ -0.89
RTN4Q9NQC3 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
RTN4Q9NQC3 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
RTN4Q9NQC3 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
RTN4Q9NQC3 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC9.5□□□□□ -0.89
RTN4Q9NQC3 QRSL1P1-201ENST00000400977 1540 ntBASIC9.5□□□□□ -0.89
RTN4Q9NQC3 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
RTN4Q9NQC3 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC9.5□□□□□ -0.89
RTN4Q9NQC3 FHL1-206ENST00000394153 2374 ntTSL 5 BASIC9.5□□□□□ -0.89
RTN4Q9NQC3 AC091046.3-201ENST00000631455 1574 ntBASIC9.5□□□□□ -0.89
RTN4Q9NQC3 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
RTN4Q9NQC3 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
RTN4Q9NQC3 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC9.49□□□□□ -0.89
RTN4Q9NQC3 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
RTN4Q9NQC3 CDKL5-209ENST00000635828 3823 ntTSL 5 BASIC9.49□□□□□ -0.89
RTN4Q9NQC3 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
RTN4Q9NQC3 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
RTN4Q9NQC3 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
RTN4Q9NQC3 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
RTN4Q9NQC3 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
RTN4Q9NQC3 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
RTN4Q9NQC3 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
RTN4Q9NQC3 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC9.49□□□□□ -0.89
RTN4Q9NQC3 OR51A10P-201ENST00000307165 937 ntBASIC9.49□□□□□ -0.89
RTN4Q9NQC3 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
RTN4Q9NQC3 SNORD3G-201ENST00000362796 215 ntBASIC9.49□□□□□ -0.89
RTN4Q9NQC3 RN7SKP173-201ENST00000362821 315 ntBASIC9.49□□□□□ -0.89
RTN4Q9NQC3 RNU6-146P-201ENST00000384602 108 ntBASIC9.49□□□□□ -0.89
RTN4Q9NQC3 TRBV23OR9-2-201ENST00000390389 335 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
RTN4Q9NQC3 TRAV13-2-201ENST00000390439 410 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
RTN4Q9NQC3 AC245036.1-201ENST00000391727 309 ntBASIC9.49□□□□□ -0.89
RTN4Q9NQC3 AL353193.1-201ENST00000421444 268 ntBASIC9.49□□□□□ -0.89
RTN4Q9NQC3 OR2B7P-201ENST00000429302 934 ntBASIC9.49□□□□□ -0.89
RTN4Q9NQC3 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC9.49□□□□□ -0.89
RTN4Q9NQC3 WBP1LP7-201ENST00000437905 363 ntBASIC9.49□□□□□ -0.89
RTN4Q9NQC3 AC002480.3-201ENST00000439823 557 ntTSL 3 BASIC9.49□□□□□ -0.89
RTN4Q9NQC3 AL391987.3-201ENST00000441101 719 ntTSL 5 BASIC9.49□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms