Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
HMG20AQ9NP66 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HMG20AQ9NP66 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HMG20AQ9NP66 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HMG20AQ9NP66 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HMG20AQ9NP66 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.75□□□□□ -1.65
HMG20AQ9NP66 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.75□□□□□ -1.65
HMG20AQ9NP66 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
HMG20AQ9NP66 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HMG20AQ9NP66 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.74□□□□□ -1.65
HMG20AQ9NP66 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.74□□□□□ -1.65
HMG20AQ9NP66 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HMG20AQ9NP66 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HMG20AQ9NP66 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HMG20AQ9NP66 IL6STP1-201ENST00000346911 1020 ntBASIC4.74□□□□□ -1.65
HMG20AQ9NP66 RN7SKP275-201ENST00000364626 301 ntBASIC4.74□□□□□ -1.65
HMG20AQ9NP66 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.74□□□□□ -1.65
HMG20AQ9NP66 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.74□□□□□ -1.65
HMG20AQ9NP66 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC4.74□□□□□ -1.65
HMG20AQ9NP66 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.74□□□□□ -1.65
HMG20AQ9NP66 AC066692.1-201ENST00000421721 457 ntBASIC4.74□□□□□ -1.65
HMG20AQ9NP66 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.74□□□□□ -1.65
HMG20AQ9NP66 HMGB3P24-201ENST00000433260 622 ntBASIC4.74□□□□□ -1.65
HMG20AQ9NP66 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.74□□□□□ -1.65
HMG20AQ9NP66 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC4.74□□□□□ -1.65
HMG20AQ9NP66 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.74□□□□□ -1.65
HMG20AQ9NP66 AC019084.1-201ENST00000457337 432 ntBASIC4.74□□□□□ -1.65
HMG20AQ9NP66 RN7SL168P-201ENST00000463821 279 ntBASIC4.74□□□□□ -1.65
HMG20AQ9NP66 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.74□□□□□ -1.65
HMG20AQ9NP66 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.74□□□□□ -1.65
HMG20AQ9NP66 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC4.74□□□□□ -1.65
HMG20AQ9NP66 RNA5SP473-201ENST00000516402 125 ntBASIC4.74□□□□□ -1.65
HMG20AQ9NP66 SNORA70.20-201ENST00000516848 126 ntBASIC4.74□□□□□ -1.65
HMG20AQ9NP66 TRIM77BP-201ENST00000524985 1119 ntBASIC4.74□□□□□ -1.65
HMG20AQ9NP66 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC4.74□□□□□ -1.65
HMG20AQ9NP66 AC092121.1-201ENST00000569452 202 ntBASIC4.74□□□□□ -1.65
HMG20AQ9NP66 RN7SL176P-201ENST00000580352 264 ntBASIC4.74□□□□□ -1.65
HMG20AQ9NP66 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC4.74□□□□□ -1.65
HMG20AQ9NP66 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.74□□□□□ -1.65
HMG20AQ9NP66 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.74□□□□□ -1.65
HMG20AQ9NP66 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC4.74□□□□□ -1.65
HMG20AQ9NP66 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.74□□□□□ -1.65
HMG20AQ9NP66 FO681491.1-202ENST00000623392 737 ntBASIC4.74□□□□□ -1.65
HMG20AQ9NP66 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.74□□□□□ -1.65
HMG20AQ9NP66 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
HMG20AQ9NP66 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HMG20AQ9NP66 NEPNP-201ENST00000404786 1371 ntBASIC4.74□□□□□ -1.65
HMG20AQ9NP66 SALL4P2-201ENST00000423288 2910 ntBASIC4.74□□□□□ -1.65
HMG20AQ9NP66 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HMG20AQ9NP66 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HMG20AQ9NP66 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
HMG20AQ9NP66 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
HMG20AQ9NP66 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
HMG20AQ9NP66 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
HMG20AQ9NP66 AL133268.1-201ENST00000405676 1401 ntBASIC4.73□□□□□ -1.65
HMG20AQ9NP66 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
HMG20AQ9NP66 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.73□□□□□ -1.65
HMG20AQ9NP66 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HMG20AQ9NP66 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
HMG20AQ9NP66 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
HMG20AQ9NP66 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.73□□□□□ -1.65
HMG20AQ9NP66 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
HMG20AQ9NP66 SNORA64.1-201ENST00000362600 132 ntBASIC4.73□□□□□ -1.65
HMG20AQ9NP66 OR2AT2P-201ENST00000413438 905 ntBASIC4.73□□□□□ -1.65
HMG20AQ9NP66 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC4.73□□□□□ -1.65
HMG20AQ9NP66 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.73□□□□□ -1.65
HMG20AQ9NP66 GAPDHP58-201ENST00000438477 1006 ntBASIC4.73□□□□□ -1.65
HMG20AQ9NP66 ARL4AP3-201ENST00000441452 574 ntBASIC4.73□□□□□ -1.65
HMG20AQ9NP66 AC108751.2-201ENST00000469993 231 ntBASIC4.73□□□□□ -1.65
HMG20AQ9NP66 AC087672.1-201ENST00000479876 766 ntBASIC4.73□□□□□ -1.65
HMG20AQ9NP66 RN7SL814P-201ENST00000487715 300 ntBASIC4.73□□□□□ -1.65
HMG20AQ9NP66 AC020890.1-201ENST00000491837 504 ntBASIC4.73□□□□□ -1.65
HMG20AQ9NP66 AC073073.1-201ENST00000493920 463 ntBASIC4.73□□□□□ -1.65
HMG20AQ9NP66 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC4.73□□□□□ -1.65
HMG20AQ9NP66 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC4.73□□□□□ -1.65
HMG20AQ9NP66 HMGB1P42-201ENST00000532126 553 ntBASIC4.73□□□□□ -1.65
HMG20AQ9NP66 AC024940.3-201ENST00000538551 316 ntBASIC4.73□□□□□ -1.65
HMG20AQ9NP66 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HMG20AQ9NP66 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.73□□□□□ -1.65
HMG20AQ9NP66 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC4.73□□□□□ -1.65
HMG20AQ9NP66 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.73□□□□□ -1.65
HMG20AQ9NP66 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC4.73□□□□□ -1.65
HMG20AQ9NP66 MIR4271-201ENST00000582451 67 ntBASIC4.73□□□□□ -1.65
HMG20AQ9NP66 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC4.73□□□□□ -1.65
HMG20AQ9NP66 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC4.73□□□□□ -1.65
HMG20AQ9NP66 AL139041.1-201ENST00000605480 610 ntBASIC4.73□□□□□ -1.65
HMG20AQ9NP66 AL121890.2-201ENST00000617644 465 ntBASIC4.73□□□□□ -1.65
HMG20AQ9NP66 5S_rRNA.28-201ENST00000638107 119 ntBASIC4.73□□□□□ -1.65
HMG20AQ9NP66 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
HMG20AQ9NP66 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
HMG20AQ9NP66 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HMG20AQ9NP66 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HMG20AQ9NP66 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.73□□□□□ -1.65
HMG20AQ9NP66 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
HMG20AQ9NP66 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
HMG20AQ9NP66 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HMG20AQ9NP66 SSXP3-201ENST00000442971 1300 ntBASIC4.72□□□□□ -1.65
HMG20AQ9NP66 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HMG20AQ9NP66 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC4.72□□□□□ -1.65
HMG20AQ9NP66 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 142.6 ms