Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CHD8Q9HCK8 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CHD8Q9HCK8 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CHD8Q9HCK8 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
CHD8Q9HCK8 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.88□□□□□ -1.63
CHD8Q9HCK8 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.88□□□□□ -1.63
CHD8Q9HCK8 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.88□□□□□ -1.63
CHD8Q9HCK8 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.88□□□□□ -1.63
CHD8Q9HCK8 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.88□□□□□ -1.63
CHD8Q9HCK8 EBLN2-201ENST00000533473 1679 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CHD8Q9HCK8 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CHD8Q9HCK8 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.88□□□□□ -1.63
CHD8Q9HCK8 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CHD8Q9HCK8 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CHD8Q9HCK8 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CHD8Q9HCK8 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CHD8Q9HCK8 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CHD8Q9HCK8 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CHD8Q9HCK8 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CHD8Q9HCK8 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.87□□□□□ -1.63
CHD8Q9HCK8 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CHD8Q9HCK8 RNA5SP428-201ENST00000365129 132 ntBASIC4.87□□□□□ -1.63
CHD8Q9HCK8 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC4.87□□□□□ -1.63
CHD8Q9HCK8 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.87□□□□□ -1.63
CHD8Q9HCK8 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.87□□□□□ -1.63
CHD8Q9HCK8 RPEP3-201ENST00000425462 676 ntBASIC4.87□□□□□ -1.63
CHD8Q9HCK8 AL050321.1-201ENST00000432363 400 ntBASIC4.87□□□□□ -1.63
CHD8Q9HCK8 OR13K1P-201ENST00000444577 975 ntBASIC4.87□□□□□ -1.63
CHD8Q9HCK8 PHBP16-201ENST00000446318 950 ntBASIC4.87□□□□□ -1.63
CHD8Q9HCK8 AC114755.5-201ENST00000447760 831 ntBASIC4.87□□□□□ -1.63
CHD8Q9HCK8 AP000797.2-201ENST00000475768 606 ntBASIC4.87□□□□□ -1.63
CHD8Q9HCK8 AC091959.2-201ENST00000477363 321 ntBASIC4.87□□□□□ -1.63
CHD8Q9HCK8 RN7SKP13-201ENST00000515933 244 ntBASIC4.87□□□□□ -1.63
CHD8Q9HCK8 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.87□□□□□ -1.63
CHD8Q9HCK8 OR6C71P-202ENST00000641886 1107 ntBASIC4.87□□□□□ -1.63
CHD8Q9HCK8 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CHD8Q9HCK8 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
CHD8Q9HCK8 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC4.87□□□□□ -1.63
CHD8Q9HCK8 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC4.87□□□□□ -1.63
CHD8Q9HCK8 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.87□□□□□ -1.63
CHD8Q9HCK8 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CHD8Q9HCK8 AC233263.6-201ENST00000631132 1963 ntBASIC4.87□□□□□ -1.63
CHD8Q9HCK8 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CHD8Q9HCK8 FHP1-201ENST00000442741 703 ntBASIC4.87□□□□□ -1.63
CHD8Q9HCK8 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC4.87□□□□□ -1.63
CHD8Q9HCK8 BZW1P1-201ENST00000454901 1240 ntBASIC4.87□□□□□ -1.63
CHD8Q9HCK8 RNU1-88P-201ENST00000459274 128 ntBASIC4.87□□□□□ -1.63
CHD8Q9HCK8 AC011276.1-201ENST00000469688 323 ntBASIC4.87□□□□□ -1.63
CHD8Q9HCK8 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.87□□□□□ -1.63
CHD8Q9HCK8 AC027334.1-201ENST00000603257 310 ntBASIC4.87□□□□□ -1.63
CHD8Q9HCK8 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.87□□□□□ -1.63
CHD8Q9HCK8 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.87□□□□□ -1.63
CHD8Q9HCK8 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.87□□□□□ -1.63
CHD8Q9HCK8 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.87□□□□□ -1.63
CHD8Q9HCK8 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CHD8Q9HCK8 DPY19L1P1-201ENST00000417811 2594 ntBASIC4.87□□□□□ -1.63
CHD8Q9HCK8 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC4.87□□□□□ -1.63
CHD8Q9HCK8 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CHD8Q9HCK8 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC4.87□□□□□ -1.63
CHD8Q9HCK8 NLN-202ENST00000502464 8354 ntTSL 5 BASIC4.87□□□□□ -1.63
CHD8Q9HCK8 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CHD8Q9HCK8 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CHD8Q9HCK8 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.86□□□□□ -1.63
CHD8Q9HCK8 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CHD8Q9HCK8 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CHD8Q9HCK8 AL590240.1-201ENST00000334118 313 ntBASIC4.86□□□□□ -1.63
CHD8Q9HCK8 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.86□□□□□ -1.63
CHD8Q9HCK8 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.86□□□□□ -1.63
CHD8Q9HCK8 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC4.86□□□□□ -1.63
CHD8Q9HCK8 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC4.86□□□□□ -1.63
CHD8Q9HCK8 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC4.86□□□□□ -1.63
CHD8Q9HCK8 AC074101.1-201ENST00000637861 241 ntBASIC4.86□□□□□ -1.63
CHD8Q9HCK8 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC4.86□□□□□ -1.63
CHD8Q9HCK8 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CHD8Q9HCK8 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CHD8Q9HCK8 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CHD8Q9HCK8 ZNF652P1-201ENST00000442420 1309 ntBASIC4.86□□□□□ -1.63
CHD8Q9HCK8 AC233968.1-201ENST00000611212 1300 ntBASIC4.86□□□□□ -1.63
CHD8Q9HCK8 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CHD8Q9HCK8 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC4.86□□□□□ -1.63
CHD8Q9HCK8 AC006511.3-201ENST00000624929 1783 ntBASIC4.86□□□□□ -1.63
CHD8Q9HCK8 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.86□□□□□ -1.63
CHD8Q9HCK8 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CHD8Q9HCK8 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC4.86□□□□□ -1.63
CHD8Q9HCK8 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC4.86□□□□□ -1.63
CHD8Q9HCK8 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CHD8Q9HCK8 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CHD8Q9HCK8 RPL7L1P3-201ENST00000455249 689 ntBASIC4.86□□□□□ -1.63
CHD8Q9HCK8 AC245028.2-201ENST00000458673 253 ntBASIC4.86□□□□□ -1.63
CHD8Q9HCK8 RPS27AP1-201ENST00000475545 471 ntBASIC4.86□□□□□ -1.63
CHD8Q9HCK8 SSX8-201ENST00000506270 579 ntBASIC4.86□□□□□ -1.63
CHD8Q9HCK8 AC006427.1-201ENST00000514359 712 ntBASIC4.86□□□□□ -1.63
CHD8Q9HCK8 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.86□□□□□ -1.63
CHD8Q9HCK8 RN7SKP260-201ENST00000516907 149 ntBASIC4.86□□□□□ -1.63
CHD8Q9HCK8 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.86□□□□□ -1.63
CHD8Q9HCK8 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.86□□□□□ -1.63
CHD8Q9HCK8 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CHD8Q9HCK8 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.86□□□□□ -1.63
CHD8Q9HCK8 AL445647.2-201ENST00000615170 130 ntBASIC4.86□□□□□ -1.63
CHD8Q9HCK8 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms