Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 AC063977.5-201ENST00000601044 974 ntBASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 AC096553.1-201ENST00000605169 829 ntBASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 AC019131.2-201ENST00000609071 870 ntBASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 AC037198.3-201ENST00000616754 526 ntBASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 CXADRP3-202ENST00000617265 1100 ntBASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 RMST_5.1-201ENST00000618704 126 ntBASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 TEX41-279ENST00000629149 609 ntTSL 5 BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 AC104260.2-201ENST00000623551 3497 ntBASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
SND1-IT1Q9HBX3 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 OR9G4-201ENST00000302957 984 ntBASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 RN7SKP153-201ENST00000365026 316 ntBASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 CDC123-202ENST00000378900 933 ntTSL 5 BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 AL034403.1-201ENST00000399414 885 ntBASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 AC013470.3-201ENST00000420252 1194 ntBASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 AKR1B10P1-201ENST00000425765 942 ntBASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 NANOGP4-201ENST00000427230 913 ntBASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 AC006335.2-201ENST00000437993 330 ntBASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 ATP6V1E1P1-201ENST00000439215 681 ntBASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 DAP3-209ENST00000465375 729 ntTSL 2 BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 AC023194.2-201ENST00000465398 406 ntBASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 LARP7P4-201ENST00000481075 878 ntBASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 AC022215.1-201ENST00000481770 362 ntBASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 snoU109.6-201ENST00000516831 118 ntBASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 AC022826.1-201ENST00000519383 805 ntBASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 AP001000.1-201ENST00000526843 742 ntBASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 ERVFRD-3-201ENST00000578561 1617 ntBASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 RN7SL435P-201ENST00000584418 282 ntBASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 GMFG-202ENST00000594700 397 ntTSL 2 BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 AC006272.2-201ENST00000594725 163 ntBASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 AC034236.3-201ENST00000605999 461 ntBASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 SSX9-202ENST00000608568 580 ntTSL 4 BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 AC244107.2-201ENST00000611773 76 ntBASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 uc_338.29-201ENST00000615099 168 ntBASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 MIR6721-201ENST00000617181 87 ntBASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 AC007204.1-201ENST00000621794 555 ntBASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 AC105105.5-201ENST00000622635 1294 ntBASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 AP002967.1-201ENST00000624203 539 ntBASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 AC011447.7-201ENST00000624228 1590 ntBASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SND1-IT1Q9HBX3 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms