Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
TRIM47Q96LD4 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
TRIM47Q96LD4 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
TRIM47Q96LD4 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC8.14□□□□□ -1.11
TRIM47Q96LD4 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
TRIM47Q96LD4 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
TRIM47Q96LD4 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
TRIM47Q96LD4 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
TRIM47Q96LD4 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
TRIM47Q96LD4 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
TRIM47Q96LD4 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
TRIM47Q96LD4 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC8.13□□□□□ -1.11
TRIM47Q96LD4 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
TRIM47Q96LD4 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
TRIM47Q96LD4 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
TRIM47Q96LD4 STAG3L4-201ENST00000352103 530 ntBASIC8.13□□□□□ -1.11
TRIM47Q96LD4 RNU6-500P-201ENST00000362349 107 ntBASIC8.13□□□□□ -1.11
TRIM47Q96LD4 RNU4-70P-201ENST00000384579 139 ntBASIC8.13□□□□□ -1.11
TRIM47Q96LD4 AL391419.1-201ENST00000398901 1275 ntBASIC8.13□□□□□ -1.11
TRIM47Q96LD4 AL356776.1-201ENST00000406574 447 ntBASIC8.13□□□□□ -1.11
TRIM47Q96LD4 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC8.13□□□□□ -1.11
TRIM47Q96LD4 AC008173.1-201ENST00000418901 264 ntBASIC8.13□□□□□ -1.11
TRIM47Q96LD4 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC8.13□□□□□ -1.11
TRIM47Q96LD4 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
TRIM47Q96LD4 AC007365.2-201ENST00000428806 458 ntBASIC8.13□□□□□ -1.11
TRIM47Q96LD4 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
TRIM47Q96LD4 RPSAP40-201ENST00000442343 891 ntBASIC8.13□□□□□ -1.11
TRIM47Q96LD4 EIF4A1P6-201ENST00000448133 1210 ntBASIC8.13□□□□□ -1.11
TRIM47Q96LD4 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC8.13□□□□□ -1.11
TRIM47Q96LD4 AC117395.2-201ENST00000463122 1128 ntBASIC8.13□□□□□ -1.11
TRIM47Q96LD4 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC8.13□□□□□ -1.11
TRIM47Q96LD4 RN7SL37P-201ENST00000490461 307 ntBASIC8.13□□□□□ -1.11
TRIM47Q96LD4 AC104136.1-201ENST00000512969 394 ntBASIC8.13□□□□□ -1.11
TRIM47Q96LD4 IGKV2D-38-201ENST00000518423 240 ntBASIC8.13□□□□□ -1.11
TRIM47Q96LD4 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC8.13□□□□□ -1.11
TRIM47Q96LD4 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC8.13□□□□□ -1.11
TRIM47Q96LD4 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC8.13□□□□□ -1.11
TRIM47Q96LD4 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC8.13□□□□□ -1.11
TRIM47Q96LD4 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
TRIM47Q96LD4 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC8.13□□□□□ -1.11
TRIM47Q96LD4 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC8.13□□□□□ -1.11
TRIM47Q96LD4 AADACP1-206ENST00000561502 1193 ntBASIC8.13□□□□□ -1.11
TRIM47Q96LD4 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC8.13□□□□□ -1.11
TRIM47Q96LD4 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC8.13□□□□□ -1.11
TRIM47Q96LD4 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC8.13□□□□□ -1.11
TRIM47Q96LD4 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC8.13□□□□□ -1.11
TRIM47Q96LD4 BNIP3P8-201ENST00000597863 560 ntBASIC8.13□□□□□ -1.11
TRIM47Q96LD4 AL109918.3-201ENST00000603072 338 ntBASIC8.13□□□□□ -1.11
TRIM47Q96LD4 AC012368.3-201ENST00000604190 219 ntBASIC8.13□□□□□ -1.11
TRIM47Q96LD4 AC069304.2-201ENST00000605154 435 ntBASIC8.13□□□□□ -1.11
TRIM47Q96LD4 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC8.13□□□□□ -1.11
TRIM47Q96LD4 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
TRIM47Q96LD4 AC089999.3-201ENST00000622440 577 ntBASIC8.13□□□□□ -1.11
TRIM47Q96LD4 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC8.13□□□□□ -1.11
TRIM47Q96LD4 CASC19-212ENST00000641153 1287 ntBASIC8.13□□□□□ -1.11
TRIM47Q96LD4 AC119674.1-207ENST00000641355 633 ntBASIC8.13□□□□□ -1.11
TRIM47Q96LD4 CASC19-232ENST00000641480 1244 ntBASIC8.13□□□□□ -1.11
TRIM47Q96LD4 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC8.13□□□□□ -1.11
TRIM47Q96LD4 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
TRIM47Q96LD4 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC8.13□□□□□ -1.11
TRIM47Q96LD4 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC8.13□□□□□ -1.11
TRIM47Q96LD4 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC8.13□□□□□ -1.11
TRIM47Q96LD4 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
TRIM47Q96LD4 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
TRIM47Q96LD4 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
TRIM47Q96LD4 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC8.13□□□□□ -1.11
TRIM47Q96LD4 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
TRIM47Q96LD4 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
TRIM47Q96LD4 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 U6.112-201ENST00000384129 70 ntBASIC8.12□□□□□ -1.11
TRIM47Q96LD4 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 AC068533.2-201ENST00000411872 306 ntBASIC8.12□□□□□ -1.11
TRIM47Q96LD4 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 BTF3P8-201ENST00000414577 526 ntBASIC8.12□□□□□ -1.11
TRIM47Q96LD4 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC8.12□□□□□ -1.11
TRIM47Q96LD4 AL022400.1-201ENST00000423946 935 ntBASIC8.12□□□□□ -1.11
TRIM47Q96LD4 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC8.12□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms