Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.34□□□□□ -1.55
VPS33AQ96AX1 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.34□□□□□ -1.55
VPS33AQ96AX1 AZGP1P2-201ENST00000454506 345 ntBASIC5.34□□□□□ -1.55
VPS33AQ96AX1 UBFD1P1-201ENST00000473259 814 ntBASIC5.34□□□□□ -1.55
VPS33AQ96AX1 SUMO1P1-201ENST00000497904 306 ntBASIC5.34□□□□□ -1.55
VPS33AQ96AX1 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC5.34□□□□□ -1.55
VPS33AQ96AX1 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.34□□□□□ -1.55
VPS33AQ96AX1 SCARNA18.1-201ENST00000516330 83 ntBASIC5.34□□□□□ -1.55
VPS33AQ96AX1 SCARNA6.1-201ENST00000516989 238 ntBASIC5.34□□□□□ -1.55
VPS33AQ96AX1 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.34□□□□□ -1.55
VPS33AQ96AX1 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.34□□□□□ -1.55
VPS33AQ96AX1 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.34□□□□□ -1.55
VPS33AQ96AX1 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.34□□□□□ -1.55
VPS33AQ96AX1 AP003396.4-201ENST00000527574 265 ntBASIC5.34□□□□□ -1.55
VPS33AQ96AX1 TRIM51DP-201ENST00000529746 596 ntBASIC5.34□□□□□ -1.55
VPS33AQ96AX1 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC5.34□□□□□ -1.55
VPS33AQ96AX1 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.34□□□□□ -1.55
VPS33AQ96AX1 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.34□□□□□ -1.55
VPS33AQ96AX1 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.34□□□□□ -1.55
VPS33AQ96AX1 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.34□□□□□ -1.55
VPS33AQ96AX1 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.34□□□□□ -1.55
VPS33AQ96AX1 AC009237.13-201ENST00000603193 276 ntBASIC5.34□□□□□ -1.55
VPS33AQ96AX1 AC023813.4-201ENST00000607580 580 ntBASIC5.34□□□□□ -1.55
VPS33AQ96AX1 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VPS33AQ96AX1 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.34□□□□□ -1.55
VPS33AQ96AX1 AL121890.2-201ENST00000617644 465 ntBASIC5.34□□□□□ -1.55
VPS33AQ96AX1 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
VPS33AQ96AX1 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VPS33AQ96AX1 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.34□□□□□ -1.55
VPS33AQ96AX1 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.55
VPS33AQ96AX1 AC112198.2-201ENST00000426589 6996 ntBASIC5.34□□□□□ -1.55
VPS33AQ96AX1 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.34□□□□□ -1.56
VPS33AQ96AX1 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
VPS33AQ96AX1 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
VPS33AQ96AX1 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
VPS33AQ96AX1 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS33AQ96AX1 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.33□□□□□ -1.56
VPS33AQ96AX1 Z95331.1-201ENST00000623075 23112 ntBASIC5.33□□□□□ -1.56
VPS33AQ96AX1 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VPS33AQ96AX1 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.33□□□□□ -1.56
VPS33AQ96AX1 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS33AQ96AX1 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VPS33AQ96AX1 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.33□□□□□ -1.56
VPS33AQ96AX1 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS33AQ96AX1 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS33AQ96AX1 RN7SKP74-201ENST00000362849 309 ntBASIC5.33□□□□□ -1.56
VPS33AQ96AX1 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS33AQ96AX1 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.33□□□□□ -1.56
VPS33AQ96AX1 CHMP1B2P-201ENST00000399581 597 ntBASIC5.33□□□□□ -1.56
VPS33AQ96AX1 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.33□□□□□ -1.56
VPS33AQ96AX1 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.33□□□□□ -1.56
VPS33AQ96AX1 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
VPS33AQ96AX1 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.33□□□□□ -1.56
VPS33AQ96AX1 AL596266.1-201ENST00000448132 400 ntBASIC5.33□□□□□ -1.56
VPS33AQ96AX1 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.33□□□□□ -1.56
VPS33AQ96AX1 AC002553.2-201ENST00000453217 340 ntBASIC5.33□□□□□ -1.56
VPS33AQ96AX1 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.33□□□□□ -1.56
VPS33AQ96AX1 AC023194.2-201ENST00000465398 406 ntBASIC5.33□□□□□ -1.56
VPS33AQ96AX1 RN7SL188P-201ENST00000469842 285 ntBASIC5.33□□□□□ -1.56
VPS33AQ96AX1 AL122020.1-201ENST00000472287 459 ntBASIC5.33□□□□□ -1.56
VPS33AQ96AX1 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS33AQ96AX1 AC044810.1-201ENST00000480271 711 ntBASIC5.33□□□□□ -1.56
VPS33AQ96AX1 OR9N1P-202ENST00000494289 481 ntBASIC5.33□□□□□ -1.56
VPS33AQ96AX1 CDH12P2-201ENST00000504393 298 ntBASIC5.33□□□□□ -1.56
VPS33AQ96AX1 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.33□□□□□ -1.56
VPS33AQ96AX1 HSD3BP3-201ENST00000514706 994 ntBASIC5.33□□□□□ -1.56
VPS33AQ96AX1 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.33□□□□□ -1.56
VPS33AQ96AX1 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.33□□□□□ -1.56
VPS33AQ96AX1 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.33□□□□□ -1.56
VPS33AQ96AX1 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.33□□□□□ -1.56
VPS33AQ96AX1 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.33□□□□□ -1.56
VPS33AQ96AX1 AC023158.1-201ENST00000561632 1025 ntBASIC5.33□□□□□ -1.56
VPS33AQ96AX1 AP005262.1-201ENST00000582646 997 ntBASIC5.33□□□□□ -1.56
VPS33AQ96AX1 FAM27E4-201ENST00000605259 342 ntBASIC5.33□□□□□ -1.56
VPS33AQ96AX1 BNIP3P41-202ENST00000616656 861 ntBASIC5.33□□□□□ -1.56
VPS33AQ96AX1 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.33□□□□□ -1.56
VPS33AQ96AX1 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.33□□□□□ -1.56
VPS33AQ96AX1 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS33AQ96AX1 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VPS33AQ96AX1 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
VPS33AQ96AX1 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS33AQ96AX1 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS33AQ96AX1 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS33AQ96AX1 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.33□□□□□ -1.56
VPS33AQ96AX1 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS33AQ96AX1 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.33□□□□□ -1.56
VPS33AQ96AX1 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.33□□□□□ -1.56
VPS33AQ96AX1 AL078621.3-201ENST00000623707 2042 ntBASIC5.33□□□□□ -1.56
VPS33AQ96AX1 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
VPS33AQ96AX1 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
VPS33AQ96AX1 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
VPS33AQ96AX1 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.32□□□□□ -1.56
VPS33AQ96AX1 AC083843.2-201ENST00000568248 6253 ntBASIC5.32□□□□□ -1.56
VPS33AQ96AX1 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.32□□□□□ -1.56
VPS33AQ96AX1 MTND4P21-201ENST00000453886 1357 ntBASIC5.32□□□□□ -1.56
VPS33AQ96AX1 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.32□□□□□ -1.56
VPS33AQ96AX1 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VPS33AQ96AX1 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.32□□□□□ -1.56
VPS33AQ96AX1 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
VPS33AQ96AX1 TMSB4XP2-201ENST00000335179 210 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms