Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 AC122688.1-201ENST00000541494 223 ntBASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 H3F3BP2-201ENST00000583907 357 ntBASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 AP003175.1-201ENST00000641383 6658 ntBASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 IGKV7-3-201ENST00000357453 298 ntBASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 XIST-210ENST00000602863 775 ntTSL 3 BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 AC244107.2-201ENST00000611773 76 ntBASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
ALMS1Q8TCU4 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 RNA5SP447-201ENST00000363749 119 ntBASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 SNORA48.7-201ENST00000391302 135 ntBASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 HSPA8P15-201ENST00000401676 786 ntBASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 MRPS21P2-201ENST00000424704 264 ntBASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 TCEA1P1-201ENST00000449716 880 ntBASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 RN7SL188P-201ENST00000469842 285 ntBASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 RPL7P19-201ENST00000469948 618 ntBASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 AC020779.1-201ENST00000478757 796 ntBASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 GLUD1P3-202ENST00000508551 200 ntBASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 RN7SKP276-201ENST00000516242 268 ntBASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 AP001804.1-201ENST00000526868 919 ntBASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 AC105129.1-201ENST00000560250 297 ntBASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 AC073091.2-201ENST00000603205 907 ntBASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 RBPJP2-201ENST00000618187 1444 ntBASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 SAMMSON-226ENST00000642089 1582 ntBASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 SNORA77-201ENST00000408716 125 ntBASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 Z95152.1-201ENST00000453556 656 ntBASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 RN7SKP260-201ENST00000516907 149 ntBASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 AC009643.1-201ENST00000532030 391 ntBASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 AC021106.3-201ENST00000623925 531 ntBASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 AP003400.3-201ENST00000624904 346 ntBASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 MIR129-1-201ENST00000384972 72 ntBASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 AL590399.2-201ENST00000427536 309 ntBASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 AC006130.2-201ENST00000586202 326 ntBASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 IGKV1OR2-9-201ENST00000603957 287 ntBASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 IGKV1OR2-11-201ENST00000604120 287 ntBASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 AC087821.1-201ENST00000623639 567 ntBASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 145.5 ms