Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 HSPD1P4-201ENST00000547203 1702 ntBASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 NEK2P2-201ENST00000438441 1338 ntBASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 AL391994.1-201ENST00000254724 282 ntBASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 YWHAZP4-201ENST00000392459 708 ntBASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 GAPDHP59-201ENST00000435908 267 ntBASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 AC007327.1-201ENST00000447461 264 ntBASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 RPL31P20-201ENST00000449593 360 ntBASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 KATNBL1P6-201ENST00000453433 915 ntBASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 AC069528.1-202ENST00000482888 637 ntBASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 AC023424.2-201ENST00000493479 777 ntBASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 AC006499.4-201ENST00000510947 694 ntBASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 SNORA74.1-201ENST00000516320 180 ntBASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 AC005730.3-201ENST00000583067 366 ntBASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 AC006539.2-201ENST00000601729 572 ntBASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 MIR6071-201ENST00000616741 78 ntBASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 AC114546.4-201ENST00000624413 369 ntBASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 AC073869.7-201ENST00000640874 297 ntBASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 AC125603.4-201ENST00000621942 2699 ntBASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 ZNF658B-201ENST00000602828 3408 ntBASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 AC090229.1-201ENST00000590983 1609 ntBASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
SHKBP1Q8TBC3 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 CR1-204ENST00000367052 7469 ntTSL 5 BASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 CR1-205ENST00000367053 7469 ntTSL 5 BASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC6.93□□□□□ -1.3
SHKBP1Q8TBC3 NACA3P-201ENST00000359690 648 ntBASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms