Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CFAP43Q8NDM7 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC8.02□□□□□ -1.13
CFAP43Q8NDM7 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
CFAP43Q8NDM7 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CFAP43Q8NDM7 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CFAP43Q8NDM7 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CFAP43Q8NDM7 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
CFAP43Q8NDM7 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CFAP43Q8NDM7 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
CFAP43Q8NDM7 SNORA57.1-201ENST00000391227 145 ntBASIC8.02□□□□□ -1.13
CFAP43Q8NDM7 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC8.02□□□□□ -1.13
CFAP43Q8NDM7 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC8.02□□□□□ -1.13
CFAP43Q8NDM7 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC8.02□□□□□ -1.13
CFAP43Q8NDM7 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC8.02□□□□□ -1.13
CFAP43Q8NDM7 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC8.02□□□□□ -1.13
CFAP43Q8NDM7 OR52H1-202ENST00000641796 1061 ntBASIC8.02□□□□□ -1.13
CFAP43Q8NDM7 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CFAP43Q8NDM7 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC8.01□□□□□ -1.13
CFAP43Q8NDM7 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC8.01□□□□□ -1.13
CFAP43Q8NDM7 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CFAP43Q8NDM7 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CFAP43Q8NDM7 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CFAP43Q8NDM7 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
CFAP43Q8NDM7 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC8.01□□□□□ -1.13
CFAP43Q8NDM7 AC034229.2-201ENST00000566945 2508 ntBASIC8.01□□□□□ -1.13
CFAP43Q8NDM7 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CFAP43Q8NDM7 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC8.01□□□□□ -1.13
CFAP43Q8NDM7 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC8.01□□□□□ -1.13
CFAP43Q8NDM7 AC004076.2-201ENST00000620532 3323 ntBASIC8.01□□□□□ -1.13
CFAP43Q8NDM7 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CFAP43Q8NDM7 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CFAP43Q8NDM7 HSPA8P15-201ENST00000401676 786 ntBASIC8.01□□□□□ -1.13
CFAP43Q8NDM7 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC8.01□□□□□ -1.13
CFAP43Q8NDM7 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC8.01□□□□□ -1.13
CFAP43Q8NDM7 ATP5A1P7-201ENST00000453978 1279 ntBASIC8.01□□□□□ -1.13
CFAP43Q8NDM7 AC010857.1-201ENST00000606398 594 ntBASIC8.01□□□□□ -1.13
CFAP43Q8NDM7 AL162574.1-201ENST00000615702 950 ntBASIC8.01□□□□□ -1.13
CFAP43Q8NDM7 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CFAP43Q8NDM7 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CFAP43Q8NDM7 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CFAP43Q8NDM7 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CFAP43Q8NDM7 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CFAP43Q8NDM7 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC8□□□□□ -1.13
CFAP43Q8NDM7 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC8□□□□□ -1.13
CFAP43Q8NDM7 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC8□□□□□ -1.13
CFAP43Q8NDM7 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC8□□□□□ -1.13
CFAP43Q8NDM7 RN7SKP16-201ENST00000410180 299 ntBASIC8□□□□□ -1.13
CFAP43Q8NDM7 AC004074.1-201ENST00000421810 1063 ntBASIC8□□□□□ -1.13
CFAP43Q8NDM7 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC8□□□□□ -1.13
CFAP43Q8NDM7 AC138761.5-201ENST00000433967 325 ntBASIC8□□□□□ -1.13
CFAP43Q8NDM7 AC046176.1-201ENST00000435260 1170 ntBASIC8□□□□□ -1.13
CFAP43Q8NDM7 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC8□□□□□ -1.13
CFAP43Q8NDM7 RPS17P2-201ENST00000461663 408 ntBASIC8□□□□□ -1.13
CFAP43Q8NDM7 AC079064.1-201ENST00000528365 362 ntBASIC8□□□□□ -1.13
CFAP43Q8NDM7 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC8□□□□□ -1.13
CFAP43Q8NDM7 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CFAP43Q8NDM7 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC8□□□□□ -1.13
CFAP43Q8NDM7 AC011944.2-201ENST00000624440 683 ntBASIC8□□□□□ -1.13
CFAP43Q8NDM7 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC8□□□□□ -1.13
CFAP43Q8NDM7 AC107980.1-201ENST00000558671 3355 ntBASIC8□□□□□ -1.13
CFAP43Q8NDM7 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC8□□□□□ -1.13
CFAP43Q8NDM7 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC8□□□□□ -1.13
CFAP43Q8NDM7 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC8□□□□□ -1.13
CFAP43Q8NDM7 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC8□□□□□ -1.13
CFAP43Q8NDM7 EEF1A1P36-201ENST00000427807 1351 ntBASIC8□□□□□ -1.13
CFAP43Q8NDM7 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CFAP43Q8NDM7 AC021876.1-201ENST00000425959 359 ntBASIC7.99□□□□□ -1.13
CFAP43Q8NDM7 RPL7AP49-201ENST00000429522 581 ntBASIC7.99□□□□□ -1.13
CFAP43Q8NDM7 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC7.99□□□□□ -1.13
CFAP43Q8NDM7 AL591438.1-201ENST00000433508 581 ntBASIC7.99□□□□□ -1.13
CFAP43Q8NDM7 RPS29P10-201ENST00000439197 166 ntBASIC7.99□□□□□ -1.13
CFAP43Q8NDM7 OR52J1P-201ENST00000450596 932 ntBASIC7.99□□□□□ -1.13
CFAP43Q8NDM7 AC011005.3-201ENST00000491624 395 ntBASIC7.99□□□□□ -1.13
CFAP43Q8NDM7 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC7.99□□□□□ -1.13
CFAP43Q8NDM7 ASB8-204ENST00000536071 568 ntTSL 4 BASIC7.99□□□□□ -1.13
CFAP43Q8NDM7 RN7SL290P-201ENST00000578661 300 ntBASIC7.99□□□□□ -1.13
CFAP43Q8NDM7 AL590392.1-201ENST00000604960 446 ntBASIC7.99□□□□□ -1.13
CFAP43Q8NDM7 uc_338.7-201ENST00000621834 124 ntBASIC7.99□□□□□ -1.13
CFAP43Q8NDM7 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.99□□□□□ -1.13
CFAP43Q8NDM7 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CFAP43Q8NDM7 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC7.99□□□□□ -1.13
CFAP43Q8NDM7 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CFAP43Q8NDM7 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
CFAP43Q8NDM7 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CFAP43Q8NDM7 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
CFAP43Q8NDM7 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
CFAP43Q8NDM7 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
CFAP43Q8NDM7 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC7.99□□□□□ -1.13
CFAP43Q8NDM7 AL031123.3-201ENST00000623345 1837 ntBASIC7.99□□□□□ -1.13
CFAP43Q8NDM7 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
CFAP43Q8NDM7 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CFAP43Q8NDM7 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CFAP43Q8NDM7 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CFAP43Q8NDM7 RPL17P50-201ENST00000396131 546 ntBASIC7.98□□□□□ -1.13
CFAP43Q8NDM7 RNU4-25P-201ENST00000410569 230 ntBASIC7.98□□□□□ -1.13
CFAP43Q8NDM7 TEX41-206ENST00000432608 661 ntTSL 3 BASIC7.98□□□□□ -1.13
CFAP43Q8NDM7 RPS29P9-201ENST00000440360 171 ntBASIC7.98□□□□□ -1.13
CFAP43Q8NDM7 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CFAP43Q8NDM7 FGB-207ENST00000509493 1164 ntTSL 5 BASIC7.98□□□□□ -1.13
CFAP43Q8NDM7 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC7.98□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms